Co-expression analysis

Gene ID HK06B20r_s_at
Gene name
Homology with ArabidopsisSimilar to At1g44810: transcription regulator (HF=1e+0)
Module size 6 genes
NF 0.24
%ile 30.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.96HK06B20r_s_atHK06B20r--1e+0At1g44810transcription regulatorO.I.H.G.S.X.
0.3240.30.95Contig3529_atContig3529--1e-89At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)O.I.H.G.S.X.
0.3240.30.95Contig6937_atContig6937--2e+0At1g45145ATTRX5O.I.H.G.S.X.
0.2732.10.96Contig7768_atContig7768--8e-25At2g45770CPFTSYO.I.H.G.S.X.
0.1716.90.96Contig6229_atContig6229--7e-7At2g40930UBP5 (UBIQUITIN-SPECIFIC PROTEASE 5)O.I.H.G.S.X.
0.097.40.95Contig6865_atContig6865--2e-7At4g00360CYP86A2 (CYTOCHROME P450 86 A2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.097.2GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.396.4GSM282021Malting_day4_Legacy_rep 2GSE11200Expression data from malting barley seedsLink to GEO
4.196.2GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.895.7GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.494.8GSM282020Malting_day4_Legacy_rep 3GSE11200Expression data from malting barley seedsLink to GEO
3.394.6GSM71156Morex stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.394.6GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.093.8GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
2.792.7GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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