Co-expression analysis

Gene ID HK05N20r_at
Gene name
Homology with ArabidopsisSimilar to Atcg00790: - (HF=3e+0)
Module size 7 genes
NF 0.59
%ile 81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.91HK05N20r_atHK05N20r--3e+0Atcg00790-O.I.H.G.S.X.
0.5975.80.92HVSMEc0011A22r2_atHVSMEc0011A22r2--1e+0At2g41920protein kinase family proteinO.I.H.G.S.X.
0.5975.80.92HVSMEc0013C11r2_atHVSMEc0013C11r2--7e-2At2g05600-O.I.H.G.S.X.
0.5774.90.92HVSMEc0010O09r2_atHVSMEc0010O09r2--1e+0At5g28630glycine-rich proteinO.I.H.G.S.X.
0.5572.00.92Contig10750_atContig10750--1e-4At1g51600TIFY2AO.I.H.G.S.X.
0.4458.90.94Contig22141_atContig22141--3e+0At3g07440unknown proteinO.I.H.G.S.X.
0.4255.20.93Contig15729_atContig15729--3e-2At3g11280myb family transcription factorO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.199.4GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
11.999.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.698.8GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
7.098.4GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.698.2GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.398.1GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.197.3GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
5.097.2GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.897.0GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
4.596.7GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.59620.1.S1_at, orthologous to the query gene, HK05N20r_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9093.7GmaAffx.59620.1.S1_atAtcg00790--8e-1At5g16920-O.I.H.G.S.X.
0.4665.5GmaAffx.51885.1.S1_atAtcg00790--3e+0At5g27247unknown proteinO.I.H.G.S.X.
0.3954.5Gma.2347.2.S1_atAtcg00790--5e-44At3g20770EIN3 (ETHYLENE-INSENSITIVE3)O.I.H.G.S.X.
0.3548.6GmaAffx.64326.1.S1_atAtcg00790--8e-1At2g17845short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.3447.2GmaAffx.52184.1.S1_atAtcg00790--3e-7At2g37840protein kinase family proteinO.I.H.G.S.X.
0.3142.2GmaAffx.81613.1.S1_atAtcg00790--2e-11At4g38470protein kinase family proteinO.I.H.G.S.X.
0.3142.2GmaAffx.5115.1.S1_atAtcg00790--4e-27At3g23540-O.I.H.G.S.X.
0.3040.4GmaAffx.80588.1.S1_atAtcg00790--3e-1At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.H.G.S.X.
0.2839.0GmaAffx.45252.2.S1_atAtcg00790--3e-10At3g14050RSH2 (RELA-SPOT HOMOLOG 2)O.I.H.G.S.X.
0.2532.6GmaAffx.25651.1.A1_atAtcg00790--1e-8At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)O.I.H.G.S.X.
0.2532.6Gma.4305.3.S1_a_atAtcg00790--5e-8At5g57940ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)O.I.H.G.S.X.
0.2430.9GmaAffx.38761.1.S1_atAtcg00790--2e-17At1g54490XRN4 (EXORIBONUCLEASE 4)O.I.H.G.S.X.
0.2025.1GmaAffx.4382.3.S1_atAtcg00790--9e-18At1g18470zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2025.1GmaAffx.75287.1.S1_atAtcg00790--2e-1At4g01000ubiquitin family proteinO.I.H.G.S.X.
0.2025.1GmaAffx.11850.2.S1_atAtcg00790--8e-18At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)O.I.H.G.S.X.
0.1923.7GmaAffx.68900.1.S1_atAtcg00790--1e+0At2g30760unknown proteinO.I.H.G.S.X.
0.1822.3Gma.5237.2.S1_atAtcg00790--5e-6At3g55960NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.1822.3GmaAffx.88272.3.S1_atAtcg00790--1e-41At4g19110protein kinase, putativeO.I.H.G.S.X.
0.1721.2GmaAffx.92886.1.S1_atAtcg00790--3e-41At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)O.I.H.G.S.X.
0.1721.2GmaAffx.42058.1.S1_atAtcg00790--3e-13At1g61040VIP5 (vernalization independence 5)O.I.H.G.S.X.
0.1619.7GmaAffx.90162.1.S1_s_atAtcg00790--2e-11At2g28840ankyrin repeat family proteinO.I.H.G.S.X.
0.1619.7GmaAffx.56265.1.S1_atAtcg00790--1e-7At5g19400SMG7O.I.H.G.S.X.
0.1518.7Gma.6034.2.S1_atAtcg00790--2e-63At3g19420ATPEN2 (ARABIDOPSIS THALIANA PTEN 2)O.I.H.G.S.X.
0.1316.3Gma.6196.2.S1_a_atAtcg00790--2e-35At2g14120dynamin-like protein 2b (ADL2b)O.I.H.G.S.X.
0.1215.1GmaAffx.65140.1.S1_atAtcg00790--7e-2At4g33670L-galactose dehydrogenase (L-GalDH)O.I.H.G.S.X.
0.1215.1GmaAffx.66282.1.S1_atAtcg00790--9e-1At5g15240amino acid transporter family proteinO.I.H.G.S.X.
0.1114.2Gma.4166.1.S1_s_atAtcg00790--2e-5At3g12740ALIS1 (ALA-INTERACTING SUBUNIT 1)O.I.H.G.S.X.
0.0912.0GmaAffx.14185.1.S1_atAtcg00790--7e-23At1g25682cell cycle control protein-relatedO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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