Co-expression analysis

Gene ID HK05N20r_at
Gene name
Homology with ArabidopsisSimilar to Atcg00790: - (HF=3e+0)
Module size 7 genes
NF 0.59
%ile 81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.91HK05N20r_atHK05N20r--3e+0Atcg00790-O.I.H.G.S.X.
0.5975.80.92HVSMEc0011A22r2_atHVSMEc0011A22r2--1e+0At2g41920protein kinase family proteinO.I.H.G.S.X.
0.5975.80.92HVSMEc0013C11r2_atHVSMEc0013C11r2--7e-2At2g05600-O.I.H.G.S.X.
0.5774.90.92HVSMEc0010O09r2_atHVSMEc0010O09r2--1e+0At5g28630glycine-rich proteinO.I.H.G.S.X.
0.5572.00.92Contig10750_atContig10750--1e-4At1g51600TIFY2AO.I.H.G.S.X.
0.4458.90.94Contig22141_atContig22141--3e+0At3g07440unknown proteinO.I.H.G.S.X.
0.4255.20.93Contig15729_atContig15729--3e-2At3g11280myb family transcription factorO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.199.4GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
11.999.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.698.8GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
7.098.4GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.698.2GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.398.1GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.197.3GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
5.097.2GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.897.0GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
4.596.7GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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