Co-expression analysis

Gene ID HK03G05u_x_at
Gene name
Homology with ArabidopsisSimilar to At2g03750: sulfotransferase family protein (HF=7e-1)
Module size 25 genes
NF 0.14
%ile 17.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.88HK03G05u_x_atHK03G05u--7e-1At2g03750sulfotransferase family proteinO.I.H.G.S.X.
0.3849.50.88HF08O15r_atHF08O15r--9e+0At4g23090unknown proteinO.I.H.G.S.X.
0.2021.10.91HVSMEb0001J09r2_atHVSMEb0001J09r2--7e+0At5g45710RHA1 (ROOT HANDEDNESS 1)O.I.H.G.S.X.
0.2021.10.90Contig6499_atContig6499--2e+0At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.H.G.S.X.
0.2021.10.95Contig4591_atContig4591--4e-2At4g22890PGR5-LIKE AO.I.H.G.S.X.
0.2021.10.92HU11H18u_s_atHU11H18u--7e-1At1g51400photosystem II 5 kD proteinO.I.H.G.S.X.
0.2021.10.95HVSMEl0011L15f2_s_atHVSMEl0011L15f2--4e-2At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.1919.60.95Contig17513_atContig17513--4e-4At5g06600UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)O.I.H.G.S.X.
0.1919.60.92HT12E20u_s_atHT12E20u--3e+0At1g09660KH domain-containing quaking protein, putativeO.I.H.G.S.X.
0.1818.20.94rbaal36e18_s_atrbaal36e18--3e-1At3g58280-O.I.H.G.S.X.
0.1716.90.94rbags24e18_atrbags24e18--3e-1At5g35320unknown proteinO.I.H.G.S.X.
0.1514.10.94Contig10859_atContig10859--8e-1At2g39320OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.1412.90.95Contig18852_atContig18852--1e+0At1g31630AGL86 (AGAMOUS-LIKE 86)O.I.H.G.S.X.
0.1412.90.96HM02P13u_s_atHM02P13u--6e+0At5g47980transferase family proteinO.I.H.G.S.X.
0.1311.60.92Contig13906_atContig13906--6e+0At5g48560basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.1210.40.95Contig19826_atContig19826--2e+0At1g16770unknown proteinO.I.H.G.S.X.
0.1210.40.95HV_CEa0014J08r2_atHV_CEa0014J08r2--4e+0At5g49050-O.I.H.G.S.X.
0.1210.40.95Contig11845_atContig11845--2e+0At2g35850unknown proteinO.I.H.G.S.X.
0.119.40.93HK04L12r_s_atHK04L12r--4e+0At5g15230GASA4 (GAST1 PROTEIN HOMOLOG 4)O.I.H.G.S.X.
0.119.40.94rbaal31p03_s_atrbaal31p03--2e-22At2g47170ARF1A1CO.I.H.G.S.X.
0.119.40.94Contig12931_atContig12931--5e+0At4g13575unknown proteinO.I.H.G.S.X.
0.108.40.95HT07O19u_s_atHT07O19u--2e+0At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)O.I.H.G.S.X.
0.075.80.93Contig5393_atContig5393--4e-20At1g10200WLIM1O.I.H.G.S.X.
0.054.10.91HVSMEc0009F03r2_atHVSMEc0009F03r2--1e+0At4g18800ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D)O.I.H.G.S.X.
0.054.10.94HK06B02r_s_atHK06B02r--1e-5At3g43810CAM7 (CALMODULIN 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.898.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.097.9GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.697.7GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.397.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.696.8GSM71151Barke stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.294.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.591.9GSM71153Barke stress and unstress replicate 4GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
2.491.4GSM372950genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.390.9GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
2.390.9GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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