Co-expression analysis

Gene ID HF11O19r_at
Gene name
Homology with ArabidopsisSimilar to At3g25140: QUA1 (QUASIMODO 1) (HF=8e-5)
Module size 6 genes
NF 0.56
%ile 78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.90HF11O19r_atHF11O19r--8e-5At3g25140QUA1 (QUASIMODO 1)O.I.H.G.S.X.
0.7388.70.90Contig18125_atContig18125--2e-6At4g13250short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.6077.30.90Contig4809_atContig4809--9e-2At1g64370unknown proteinO.I.H.G.S.X.
0.4661.00.90Contig2878_atContig2878--4e-1At3g496302-oxoacid-dependent oxidase, putativeO.I.H.G.S.X.
0.4053.10.90Contig20641_atContig20641--9e-1At5g01380transcription factorO.I.H.G.S.X.
0.2732.10.90Contig8487_atContig8487--8e-6At1g28490SYP61 (SYNTAXIN OF PLANTS 61)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.798.3GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.198.0GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.997.9GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.596.7GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.596.7GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.496.6GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.196.2GSM372973genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372972genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM146360Golden Promise Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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