Co-expression analysis

Gene ID HF08O15r_at
Gene name
Homology with ArabidopsisSimilar to At4g23090: unknown protein (HF=9e+0)
Module size 6 genes
NF 0.05
%ile 6.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.90.90HF08O15r_atHF08O15r--9e+0At4g23090unknown proteinO.I.H.G.S.X.
0.4053.10.89HS07N11u_atHS07N11u--4e+0At5g51451unknown proteinO.I.H.G.S.X.
0.3342.60.87EBma03_SQ001_K06_x_atEBma03_SQ001_K06--8e-17At3g44110ATJ3O.I.H.G.S.X.
0.2935.50.90HT09J11u_atHT09J11u--7e-1At1g43600NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.064.80.87HK03G05u_x_atHK03G05u--7e-1At2g03750sulfotransferase family proteinO.I.H.G.S.X.
0.011.10.87HS18J04u_atHS18J04u--6e-1At1g01400unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.699.4GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
9.198.9GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
7.498.5GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
6.798.3GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
6.398.1GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.897.8GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.797.7GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.697.7GSM398252Martin_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.397.4GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
5.097.2GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.7455.4.S1_at, orthologous to the query gene, HF08O15r_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6388.1PtpAffx.7455.4.S1_atAt4g23090hypothetical protein-5e-12At3g19950zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3661.6PtpAffx.127734.1.A1_atAt4g23090hypothetical protein-8e+0At2g03320unknown proteinO.I.H.G.S.X.
0.1321.6PtpAffx.116442.1.S1_atAt4g23090--3e-12At3g19950zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.069.8PtpAffx.51765.2.A1_atAt4g23090hypothetical protein-1e-13At3g03890FMN bindingO.I.H.G.S.X.
0.069.8PtpAffx.21967.1.A1_atAt4g23090hypothetical protein-1e-44At1g03330small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putativeO.I.H.G.S.X.
0.046.9PtpAffx.16869.1.A1_atAt4g23090hypothetical protein-4e-38At5g11500unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage