Co-expression analysis

Gene ID HF05G20r_at
Gene name
Homology with ArabidopsisSimilar to At3g19850: phototropic-responsive NPH3 family protein (HF=8e-1)
Module size 7 genes
NF 0.36
%ile 48.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4053.10.89HF05G20r_atHF05G20r--8e-1At3g19850phototropic-responsive NPH3 family proteinO.I.H.G.S.X.
0.5774.90.92HVSMEg0007J08r2_atHVSMEg0007J08r2--5e+0At3g58760ankyrin protein kinase, putativeO.I.H.G.S.X.
0.5066.90.93HVSMEa0015G15r2_s_atHVSMEa0015G15r2--8e-1At3g60090VQ motif-containing proteinO.I.H.G.S.X.
0.4255.20.92Contig13331_s_atContig13331--6e-16At2g21860violaxanthin de-epoxidase-relatedO.I.H.G.S.X.
0.2935.50.91Contig11593_x_atContig11593--1e+1Atcg00800-O.I.H.G.S.X.
0.2528.90.93Contig20667_atContig20667--1e+0At5g08480VQ motif-containing proteinO.I.H.G.S.X.
0.2326.10.91Contig2394_s_atContig2394--1e-7At2g18730diacylglycerol kinase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.3GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.294.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.294.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.194.1GSM261059Xantha b-12 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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