Co-expression analysis

Gene ID HD08F08r_at
Gene name
Homology with ArabidopsisSimilar to At5g26673: - (HF=7e-1)
Module size 6 genes
NF 0.04
%ile 5.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.88HD08F08r_atHD08F08r--7e-1At5g26673-O.I.H.G.S.X.
0.3342.60.95Contig10968_atContig10968--4e-15At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.1514.10.95Contig22276_atContig22276--1e+0At3g50780-O.I.H.G.S.X.
0.097.40.95Contig17672_atContig17672--2e-16At5g23300PYRD (pyrimidine d)O.I.H.G.S.X.
0.064.80.90Contig16315_atContig16315--5e+0At4g11550DC1 domain-containing proteinO.I.H.G.S.X.
0.011.10.93Contig5295_atContig5295--2e-113At2g27210kelch repeat-containing serine/threonine phosphoesterase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.795.5GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
3.394.6GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
3.294.3GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.294.3GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.294.3GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.893.1GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
2.893.1GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.792.7GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
2.692.3GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.692.3GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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