Co-expression analysis

Gene ID HD07M18r_at
Gene name
Homology with ArabidopsisSimilar to At3g29370: unknown protein (HF=7e-1)
Module size 19 genes
NF 0.21
%ile 26.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9298.40.74HD07M18r_atHD07M18r--7e-1At3g29370unknown proteinO.I.H.G.S.X.
0.5674.30.80Contig9882_s_atContig9882--2e-18At4g17050UGLYAH (UREIDOGLYCINE AMINOHYDROLASE)O.I.H.G.S.X.
0.2732.10.87HVSMEf0011J16r2_atHVSMEf0011J16r2--1e+0At1g58100TCP family transcription factor, putativeO.I.H.G.S.X.
0.2122.60.88Contig4579_s_atContig4579--2e-9At5g21150PAZ domain-containing protein / piwi domain-containing proteinO.I.H.G.S.X.
0.2122.60.91Contig7298_atContig7298--6e-13At4g27700rhodanese-like domain-containing proteinO.I.H.G.S.X.
0.2021.10.92Contig6211_atContig6211--8e-9At1g04630MEE4 (maternal effect embryo arrest 4)O.I.H.G.S.X.
0.1919.60.87EBro07_SQ002_K15_x_atEBro07_SQ002_K15--6e-2At5g26717-O.I.H.G.S.X.
0.1818.20.87Contig24870_atContig24870--1e+0At4g29980unknown proteinO.I.H.G.S.X.
0.1818.20.91Contig9302_s_atContig9302--3e+0At2g46780RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.1716.90.94Contig10539_atContig10539--5e-14At1g10210ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1)O.I.H.G.S.X.
0.1514.10.90HY09E16u_atHY09E16u--4e+0At5g02680ATP binding / aminoacyl-tRNA ligase/ nucleotide bindingO.I.H.G.S.X.
0.1514.10.92Contig3808_s_atContig3808--7e-6At4g04080ISU3 (ISCU-LIKE 3)O.I.H.G.S.X.
0.1514.10.90HVSMEf0011J01r2_s_atHVSMEf0011J01r2--6e-2At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)O.I.H.G.S.X.
0.1412.90.91Contig9015_atContig9015--2e+0At5g67360ARA12O.I.H.G.S.X.
0.1412.90.90rbaal15j13_s_atrbaal15j13susiba2 protein-3e+0At2g39470PPL2 (PsbP-like protein 2)O.I.H.G.S.X.
0.1210.40.92Contig11502_atContig11502--2e-1At2g20920unknown proteinO.I.H.G.S.X.
0.108.40.87Contig14148_atContig14148--2e-3At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.H.G.S.X.
0.108.40.86Contig23662_atContig23662--3e-1At2g13770unknown proteinO.I.H.G.S.X.
0.108.40.87HVSMEn0009D08r2_atHVSMEn0009D08r2--6e-1At1g36940unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.598.8GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
6.097.9GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
5.297.4GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
5.297.4GSM261053Bonus Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.897.0GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM261037Dicktoo-subzero-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
4.696.8GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.296.3GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
4.096.0GSM398256Martin_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.394.6GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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