Co-expression analysis

Gene ID HB26D17r_x_at
Gene name
Homology with ArabidopsisSimilar to At5g38180: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=3e+0)
Module size 6 genes
NF 0.07
%ile 8.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.93HB26D17r_x_atHB26D17r--3e+0At5g38180protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2732.10.92Contig3074_atContig3074--6e+0At3g52090NRPB11O.I.H.G.S.X.
0.1615.30.92HK04G23r_s_atHK04G23r--1e+1At5g57280methyltransferaseO.I.H.G.S.X.
0.043.40.93Contig13228_atContig13228--2e-1At5g07360amidase family proteinO.I.H.G.S.X.
0.032.60.93Contig18315_atContig18315--3e-8At2g18770signal recognition particle bindingO.I.H.G.S.X.
0.032.60.92HF21B24r_s_atHF21B24r--6e-2At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.299.2GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.798.9GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.598.6GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.098.4GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.397.4GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.197.3GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.097.2GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO
4.796.9GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.796.9GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.396.4GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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