Co-expression analysis

Gene ID	HB25J22r_x_at
Gene name
Homology with Arabidopsis	Similar to At5g04790: unknown protein (HF=9e+0)
Module size	6 genes
NF	0.37
%ile	49.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.0	0.90	HB25J22r_x_at	HB25J22r	-	-	9e+0	At5g04790	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.90	HF22K12r_at	HF22K12r	-	-	5e+0	At5g23680	sterile alpha motif (SAM) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.92	Contig13375_at	Contig13375	-	-	3e-1	At5g55750	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.42	55.2	0.89	Contig7312_s_at	Contig7312	-	-	7e-2	At2g32650	-	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.90	HA08e10r_at	HA08e10r	-	-	2e-1	At1g23260	MMZ1 (MMS ZWEI HOMOLOGUE 1)	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.90	Contig21007_at	Contig21007	-	-	1e+0	At2g27520	F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
28.4	99.8	GSM238424	Endosperm 48 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
16.0	99.6	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
9.9	99.1	GSM238426	Endosperm 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
8.5	98.8	GSM238422	Endosperm 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
7.7	98.6	GSM238425	Endosperm 48 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.4	98.1	GSM282026	Malting_day1_Legacy_rep4	GSE11200	Expression data from malting barley seeds
5.6	97.7	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
5.4	97.5	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
4.4	96.6	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.3	96.4	GSM238436	Embryo 48 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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