Co-expression analysis

Gene ID HB18P10r_at
Gene name
Homology with ArabidopsisSimilar to At1g11850: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.16
%ile 19.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.75HB18P10r_atHB18P10r--3e+0At1g11850unknown proteinO.I.H.G.S.X.
0.3647.10.97Contig4072_atContig4072--2e+0At2g3161040S ribosomal protein S3 (RPS3A)O.I.H.G.S.X.
0.3647.10.97Contig30_s_atContig30--4e-19At5g59690histone H4O.I.H.G.S.X.
0.2326.10.97Contig3806_s_atContig3806--1e-3At2g43710SSI2O.I.H.G.S.X.
0.1514.10.96Contig20549_atContig20549--2e-27At2g39480PGP6 (P-GLYCOPROTEIN 6)O.I.H.G.S.X.
0.054.10.94Contig13652_atContig13652--8e-7At1g32090early-responsive to dehydration protein-related / ERD protein-relatedO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4458.90.95Contig5745_s_atContig5745--1e-1At1g60870MEE9 (maternal effect embryo arrest 9)O.I.H.G.S.X.
0.4458.90.96Contig6438_s_atContig6438--6e-1At2g44581protein binding / zinc ion bindingO.I.H.G.S.X.
0.4458.90.97Contig21617_atContig21617--3e-1At4g31470pathogenesis-related protein, putativeO.I.H.G.S.X.
0.4053.10.95Contig12587_atContig12587--4e-1At5g64530XND1O.I.H.G.S.X.
0.3849.50.97Contig3727_atContig3727--5e-66At3g62560GTP-binding protein, putativeO.I.H.G.S.X.
0.3647.10.94Contig12625_atContig12625--5e-11At1g09440protein kinase family proteinO.I.H.G.S.X.
0.3647.10.96Contig17823_atContig17823--2e+0At5g52720metal ion bindingO.I.H.G.S.X.
0.3647.10.96Contig4143_atContig4143--5e-1At3g06778heat shock protein binding / unfolded protein bindingO.I.H.G.S.X.
0.3647.10.97Contig3659_atContig3659--3e-7At4g29060emb2726 (embryo defective 2726)O.I.H.G.S.X.
0.3647.10.97Contig3558_s_atContig3558--2e-15At1g24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putativeO.I.H.G.S.X.
0.3647.10.97HD13H12r_s_atHD13H12r--2e-1At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.3342.60.95Contig370_atContig370--3e-23At5g60390elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.3342.60.96Contig3345_atContig3345--4e-7At5g46020unknown proteinO.I.H.G.S.X.
0.3342.60.96Contig11867_s_atContig11867--4e-1At1g03790SOM (SOMNUS)O.I.H.G.S.X.
0.3138.60.88Contig25065_atContig25065--4e+0At5g40981unknown proteinO.I.H.G.S.X.
0.3138.60.94Contig3496_atContig3496--2e-1Atcg01070-O.I.H.G.S.X.
0.3138.60.95Contig14426_atContig14426--9e-2At1g80820CCR2 (CINNAMOYL COA REDUCTASE)O.I.H.G.S.X.
0.3138.60.96Contig2990_atContig2990--1e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.2935.50.93EBed01_SQ002_J04_atEBed01_SQ002_J04--4e+0At2g29980FAD3 (FATTY ACID DESATURASE 3)O.I.H.G.S.X.
0.2935.50.96Contig7506_atContig7506--2e-39At3g23310protein kinase, putativeO.I.H.G.S.X.
0.2835.50.94Contig9253_atContig9253--8e-1At1g11360universal stress protein (USP) family proteinO.I.H.G.S.X.
0.2732.10.96rbaal22l07_s_atrbaal22l07vacuolar ATPase B subunit-1e-1At3g44100MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.
0.2732.10.96Contig10323_atContig10323--6e-1At5g65050AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31)O.I.H.G.S.X.
0.2732.10.96Contig25107_atContig25107--2e+0At4g39235unknown proteinO.I.H.G.S.X.
0.2528.90.95Contig17222_atContig17222--4e-12At1g08090ATNRT2:1 (NITRATE TRANSPORTER 2:1)O.I.H.G.S.X.
0.2528.90.96Contig24657_atContig24657--2e-2At5g18940Mo25 family proteinO.I.H.G.S.X.
0.2528.90.96HA03B13u_s_atHA03B13u--8e-4At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)O.I.H.G.S.X.
0.2528.90.96Contig21610_atContig21610--4e+1At5g16770AtMYB9 (myb domain protein 9)O.I.H.G.S.X.
0.2528.90.96rbah59f07_s_atrbah59f07--4e+0At3g24160PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)O.I.H.G.S.X.
0.2528.90.97Contig5444_s_atContig5444--1e+0At5g51210OLEO3 (OLEOSIN3)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.2GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.897.0GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.296.3GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM373003genotype: 11542 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.595.1GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.394.6GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.194.1GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.194.1GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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