Co-expression analysis

Gene ID HB18P10r_at
Gene name
Homology with ArabidopsisSimilar to At1g11850: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.16
%ile 19.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.75HB18P10r_atHB18P10r--3e+0At1g11850unknown proteinO.I.H.G.S.X.
0.3647.10.97Contig4072_atContig4072--2e+0At2g3161040S ribosomal protein S3 (RPS3A)O.I.H.G.S.X.
0.3647.10.97Contig30_s_atContig30--4e-19At5g59690histone H4O.I.H.G.S.X.
0.2326.10.97Contig3806_s_atContig3806--1e-3At2g43710SSI2O.I.H.G.S.X.
0.1514.10.96Contig20549_atContig20549--2e-27At2g39480PGP6 (P-GLYCOPROTEIN 6)O.I.H.G.S.X.
0.054.10.94Contig13652_atContig13652--8e-7At1g32090early-responsive to dehydration protein-related / ERD protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.2GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.897.0GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.296.3GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM373003genotype: 11542 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.595.1GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.394.6GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.194.1GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.194.1GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1609550_s_at, orthologous to the query gene, HB18P10r_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4057.71609550_s_atAt1g11850hypothetical protein LOC100257178-1e-21At5g2029040S ribosomal protein S8 (RPS8A)O.I.H.G.S.X.
0.6787.91621695_atAt1g11850hypothetical protein LOC100261060-2e-24At1g68070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6183.21610020_atAt1g11850hypothetical protein LOC100260445-2e-114At2g27450NLP1 (NITRILASE-LIKE PROTEIN 1)O.I.H.G.S.X.
0.5577.31609445_atAt1g11850hypothetical protein LOC100242218-6e-69At4g29160SNF7.1O.I.H.G.S.X.
0.5375.21617603_atAt1g11850hypothetical protein LOC100262919-5e-9At5g61970signal recognition particle-related / SRP-relatedO.I.H.G.S.X.
0.3141.31617016_atAt1g11850hypothetical protein LOC100261969-3e-1At1g04960-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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