Co-expression analysis

Gene ID HB04L12r_at
Gene name
Homology with ArabidopsisSimilar to At5g55360: long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein (HF=4e+0)
Module size 6 genes
NF 0.42
%ile 58.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.90.96HB04L12r_atHB04L12r--4e+0At5g55360long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.H.G.S.X.
0.5369.70.96Contig7570_atContig7570--1e-7At1g06960small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putativeO.I.H.G.S.X.
0.4762.20.96Contig361_s_atContig361--9e-8At5g20830SUS1 (SUCROSE SYNTHASE 1)O.I.H.G.S.X.
0.3849.50.96Contig5733_atContig5733--2e+0At5g47670NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)O.I.H.G.S.X.
0.3545.10.96Contig376_s_atContig376--5e+0At1g28135unknown proteinO.I.H.G.S.X.
0.2935.50.96Contig9459_atContig9459--1e-2At5g54800GPT1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.498.5GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.997.1GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.895.7GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.695.3GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.194.1GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.591.9GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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