Co-expression analysis

Gene ID HA31F17r_at
Gene name
Homology with ArabidopsisSimilar to At4g15975: protein binding / zinc ion binding (HF=4e-3)
Module size 6 genes
NF 0.66
%ile 87.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.95HA31F17r_atHA31F17r--4e-3At4g15975protein binding / zinc ion bindingO.I.H.G.S.X.
0.6784.70.96HB23O15r_s_atHB23O15r--5e-1At2g05370-O.I.H.G.S.X.
0.6784.70.96Contig6705_atContig6705--2e-20At3g17810dihydroorotate dehydrogenase family protein / dihydroorotate oxidase family proteinO.I.H.G.S.X.
0.6380.30.94Contig7879_atContig7879--2e-6At5g49950embryogenesis-associated protein-relatedO.I.H.G.S.X.
0.4661.00.93Contig5611_atContig5611--2e-3At2g30060Ran-binding protein 1b (RanBP1b)O.I.H.G.S.X.
0.4053.10.95Contig5127_s_atContig5127--4e-2At1g68580agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.997.9GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.997.1GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.997.1GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
4.796.9GSM372991genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.696.8GSM372995genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.596.7GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.296.3GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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