Co-expression analysis

Gene ID HA27E10r_x_at
Gene name
Homology with ArabidopsisSimilar to At2g39390: 60S ribosomal protein L35 (RPL35B) (HF=3e-5)
Module size 6 genes
NF 0.63
%ile 84.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.98HA27E10r_x_atHA27E10r--3e-5At2g3939060S ribosomal protein L35 (RPL35B)O.I.H.G.S.X.
0.6784.70.98HS08B03u_s_atHS08B03u--3e-22At5g5842040S ribosomal protein S4 (RPS4D)O.I.H.G.S.X.
0.6784.70.98Contig23141_atContig23141--1e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.
0.5572.00.99Contig23027_atContig23027--1e-1At3g26790FUS3 (FUSCA 3)O.I.H.G.S.X.
0.4863.20.98Contig3923_atContig3923--4e-1At3g04460PEX12O.I.H.G.S.X.
0.3342.60.99Contig19788_atContig19788--3e-1At4g26840SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.998.7GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
7.698.6GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
7.198.4GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.397.4GSM398273Moroc9-75_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.696.8GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.596.7GSM398275Moroc9-75_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.995.8GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.895.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
3.895.7GSM373004genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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