Co-expression analysis

Gene ID HA12A08u_s_at
Gene name
Homology with ArabidopsisSimilar to At1g22780: PFL (POINTED FIRST LEAVES) (HF=5e-2)
Module size 6 genes
NF 0.72
%ile 92.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.98HA12A08u_s_atHA12A08u--5e-2At1g22780PFL (POINTED FIRST LEAVES)O.I.H.G.S.X.
0.6784.70.99Contig11081_atContig11081--1e-26At5g47640NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2)O.I.H.G.S.X.
0.6784.70.99Contig10380_x_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.6784.70.99Contig19387_atContig19387--2e-1At3g30580unknown proteinO.I.H.G.S.X.
0.5774.90.98EBem09_SQ001_B21_s_atEBem09_SQ001_B21--2e+0At5g36920unknown proteinO.I.H.G.S.X.
0.5674.30.98HI05M04r_s_atHI05M04r--1e-23At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.9GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.897.8GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
5.797.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
4.196.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.895.7GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.895.7GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
3.795.5GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
3.795.5GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.595.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
3.494.8GSM372977genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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