Co-expression analysis

Gene ID HA11C06u_at
Gene name
Homology with ArabidopsisSimilar to At3g11570: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.03
%ile 4.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.76HA11C06u_atHA11C06u--4e+0At3g11570unknown proteinO.I.H.G.S.X.
0.097.40.90Contig480_atContig480--1e+0At4g15710unknown proteinO.I.H.G.S.X.
0.043.40.92HA06g08r_x_atHA06g08r--8e-7At5g04750F1F0-ATPase inhibitor protein, putativeO.I.H.G.S.X.
0.021.80.90EBed01_SQ002_N06_atEBed01_SQ002_N06--2e+0At5g35695unknown proteinO.I.H.G.S.X.
0.011.10.94Contig5724_atContig5724--4e-12At1g06570PDS1 (PHYTOENE DESATURATION 1)O.I.H.G.S.X.
0.011.10.92HY02N18u_s_atHY02N18u--8e+0Atmg01050-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.998.7GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.198.0GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.796.9GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.394.6GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
2.893.1GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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