Co-expression analysis

Gene ID	HA10M14u_s_at
Gene name
Homology with Arabidopsis	Similar to At3g03240: esterase/lipase/thioesterase family protein (HF=2e+0)
Module size	24 genes
NF	0.34
%ile	46.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	86.0	0.94	HA10M14u_s_at	HA10M14u	-	-	2e+0	At3g03240	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.49	63.7	0.96	Contig5244_at	Contig5244	-	-	1e-37	At5g53460	GLT1	O.I.	H.G.	S.X.	Please select
0.41	53.9	0.96	Contig6203_at	Contig6203	-	-	1e-3	At1g70110	lectin protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.41	53.9	0.96	Contig272_s_at	Contig272	-	-	5e-1	At3g45230	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	HVSMEb0001F21r2_x_at	HVSMEb0001F21r2	-	-	4e+0	At5g48170	SLY2 (SLEEPY2)	O.I.	H.G.	S.X.	Please select
0.39	50.5	0.95	Contig4296_at	Contig4296	-	-	5e-38	At1g21720	PBC1 (PROTEASOME BETA SUBUNIT C1)	O.I.	H.G.	S.X.	Please select
0.39	50.5	0.97	Contig326_x_at	Contig326	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.97	Contig3118_at	Contig3118	-	-	3e-68	At3g27240	cytochrome c1, putative	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.96	Contig8442_at	Contig8442	-	-	5e-24	At1g34470	permease-related	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.96	Contig3967_at	Contig3967	-	-	6e-16	At5g47040	LON2 (LON PROTEASE 2)	O.I.	H.G.	S.X.	Please select
0.34	43.6	0.96	EBma04_SQ003_K13_s_at	EBma04_SQ003_K13	-	-	2e+0	At3g60520	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	43.6	0.95	Contig3850_at	Contig3850	-	-	1e-57	At1g79210	20S proteasome alpha subunit B, putative	O.I.	H.G.	S.X.	Please select
0.34	43.6	0.95	Contig4462_at	Contig4462	-	-	3e-3	At2g18162	CPuORF1 (Conserved peptide upstream open reading frame 1)	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.96	Contig6968_at	Contig6968	-	-	8e-19	At3g22830	AT-HSFA6B	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.96	Contig5724_at	Contig5724	-	-	4e-12	At1g06570	PDS1 (PHYTOENE DESATURATION 1)	O.I.	H.G.	S.X.	Please select
0.30	37.0	0.97	Contig4873_s_at	Contig4873	-	-	4e+0	At5g17847	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	37.0	0.94	Contig13861_at	Contig13861	-	-	5e-1	At3g49570	LSU3 (RESPONSE TO LOW SULFUR 3)	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.95	Contig3229_s_at	Contig3229	-	-	7e+0	At5g54410	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.96	HS05E04u_s_at	HS05E04u	-	-	4e-3	At5g35590	PAA1 (PROTEASOME ALPHA SUBUNIT A 1)	O.I.	H.G.	S.X.	Please select
0.28	35.5	0.96	Contig4563_at	Contig4563	-	-	5e-15	At3g17240	mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)	O.I.	H.G.	S.X.	Please select
0.26	30.4	0.96	rbaal18e24_s_at	rbaal18e24	-	-	9e+0	At4g06536	-	O.I.	H.G.	S.X.	Please select
0.26	30.4	0.96	Contig3420_at	Contig3420	-	-	5e-66	At5g67380	CKA1 (CASEIN KINASE ALPHA 1)	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.96	Contig6376_at	Contig6376	-	-	1e-10	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.96	Contig9787_at	Contig9787	-	-	4e+0	At2g27505	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.4	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
2.6	92.3	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
2.6	92.3	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
2.5	91.9	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
2.4	91.4	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
2.4	91.4	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
2.2	90.3	GSM146366	Maythorpe Root Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.2	90.3	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
2.1	89.7	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
2.1	89.7	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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