Co-expression analysis

Gene ID	HA04j23r_at
Gene name
Homology with Arabidopsis	Similar to At5g58990: unknown protein (HF=1e+1)
Module size	6 genes
NF	0.08
%ile	10.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	53.1	0.75	HA04j23r_at	HA04j23r	-	-	1e+1	At5g58990	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.80	EBem04_SQ002_D16_at	EBem04_SQ002_D16	-	-	9e-1	At4g29470	phospholipase A2, putative	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.91	EBro03_SQ007_C24_at	EBro03_SQ007_C24	-	-	1e+0	At4g15885	kinesin motor protein-related	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.91	EBan01_SQ003_M14_at	EBan01_SQ003_M14	-	-	9e+0	At4g16980	arabinogalactan-protein family	O.I.	H.G.	S.X.	Please select
0.16	15.3	0.91	HVSMEn0004H06r2_at	HVSMEn0004H06r2	-	-	4e-16	At2g18390	TTN5 (TITAN 5)	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.81	Contig24522_at	Contig24522	-	-	5e-4	At5g06740	lectin protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
33.1	99.9	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
22.2	99.8	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
20.0	99.7	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
19.6	99.7	GSM238413	Endosperm 4DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
11.0	99.2	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
9.2	99.0	GSM238415	Endosperm 8DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
7.8	98.6	GSM238417	Endosperm 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
7.6	98.6	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.4	98.5	GSM238418	Endosperm 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.7	98.3	GSM238416	Endosperm 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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