Co-expression analysis

Gene ID GmaAffx.99.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to Atcg00800: - (HF=1e-102)
Module size 6 genes
NF 0.07
%ile 21.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5778.80.95GmaAffx.99.1.S1_s_atBI942859--1e-102Atcg00800-O.I.H.G.S.X.
0.6786.10.94GmaAffx.87677.1.S1_atBU080975--6e-11Atcg01130-O.I.H.G.S.X.
0.6786.10.96GmaAffx.35134.1.S1_atBM892966--1e-5Atcg01130-O.I.H.G.S.X.
0.3650.80.96GmaAffx.80255.4.S1_atAW202110--7e-32Atcg00500-O.I.H.G.S.X.
0.1013.00.95GmaAffx.5291.1.S1_atAW569952--1e-63Atcg01310-O.I.H.G.S.X.
0.013.40.95GmaAffx.73480.1.S1_atBM092359--4e-1At4g08930ATAPRL6 (APR-like 6)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.898.4GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
5.598.3GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.498.2GSM238034Soybean-2601R-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.298.1GSM238059Soybean-S03W4-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.198.1GSM238057Soybean-S03W4-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.998.0GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
4.597.7GSM170924V2 Control, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
4.597.7GSM236910Soybean_nonapicalmeristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.397.5GSM238032Soybean-2601R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.397.5GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
4.297.4GSM238056Soybean-PS46R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.297.4GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
4.297.4GSM170929Rust Innoculated, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
4.197.3GSM238043Soybean-Bayfield-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.197.3GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.197.3GSM237070Soy_non-shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.197.3GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.997.1GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.897.0GSM238047Soybean-Mandarin-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.796.8GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.696.7GSM238036Soybean-Bayfield-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.696.7GSM238054Soybean-PS46R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.596.6GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.496.4GSM170925V2 Control, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.496.4GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
3.496.4GSM238033Soybean-2601R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.195.8GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.095.6GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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