Co-expression analysis

Gene ID	GmaAffx.93627.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g18620: CHR17 (CHROMATIN REMODELING FACTOR17) (HF=2e-44)
Module size	11 genes
NF	0.51
%ile	82.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	91.9	0.98	GmaAffx.93627.1.S1_s_at	CF809352	-	-	2e-44	At5g18620	CHR17 (CHROMATIN REMODELING FACTOR17)	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.98	Gma.12601.1.S1_at	CD392236	-	-	6e-50	At5g67320	HOS15 (high expression of osmotically responsive genes 15)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.98	Gma.8652.1.A1_at	CD407809	-	-	3e-1	At1g48160	signal recognition particle 19 kDa protein, putative / SRP19, putative	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.98	Gma.4136.1.S1_at	BE824037	-	-	4e-20	At5g05230	ubiquitin-protein ligase	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.98	Gma.12593.1.S1_a_at	BE823660	-	-	6e-9	At2g32170	-	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	Gma.8066.1.A1_at	BQ611504	-	-	1e-1	At1g54170	CID3 (CTC-Interacting Domain 3)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.55686.1.S1_at	BI970602	-	-	7e-7	At5g43560	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.69858.1.A1_at	BU547559	-	-	5e+0	At5g48080	-	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.13242.1.S1_at	CD396483	NAC domain protein	-	1e-5	At5g64060	anac103 (Arabidopsis NAC domain containing protein 103)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	Gma.8340.1.S1_at	AW201258	-	-	3e-3	At1g72390	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	GmaAffx.661.1.S1_at	BI969786	-	-	2e+0	At1g67080	ABA4 (abscisic acid (ABA)-deficient 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.6	GSM293126	3_C038.1O.R9O1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292575	85_C136.1H.R9H2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292373	47_C104.1F.R9F3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294059	17_3118.2G.R9G2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294197	4_3138.2H.R9H2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293789	33_3058.2D.R9D1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294571	41_3212.2L.R9L3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294293	45_3162.2I.R9I3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM292768	30_C198.1K.R9K3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM292258	78_C034.1B.R9B3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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