Co-expression analysis

Gene ID GmaAffx.93494.1.A1_s_at
Gene name chalcone isomerase 4-like
Homology with ArabidopsisSimilar to At5g05270: chalcone-flavanone isomerase family protein (HF=3e-4)
Module size 8 genes
NF 0.56
%ile 86.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.50.96GmaAffx.93494.1.A1_s_atCF809219chalcone isomerase 4-like-3e-4At5g05270chalcone-flavanone isomerase family proteinO.I.H.G.S.X.
0.6382.90.97Gma.13342.1.A1_atAW349994--2e-1At4g13660PRR2 (PINORESINOL REDUCTASE 2)O.I.H.G.S.X.
0.5979.50.97Gma.15492.1.S1_s_atAF276302.1chalcone isomerase-2e+0At1g52510hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.5778.80.97Gma.4300.1.S1_s_atS46989.1chalcone synthase-5e-29At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.5374.20.98Gma.1689.1.S1_s_atAB007907.16-phosphogluconate dehydrogenase-1e-114At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.5374.20.97Gma.6602.2.S1_s_atBI320883--4e-103At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.4259.30.97GmaAffx.37677.1.S1_s_atBE022626HIDH mRNA for 2-hydroxyisoflavanone dehydratase-3e-1At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.4057.10.97GmaAffx.92278.1.S1_s_atCF8080036-phosphogluconate dehydrogenase-4e-74At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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