Co-expression analysis

Gene ID GmaAffx.93286.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g16150: L-asparaginase, putative / L-asparagine amidohydrolase, putative (HF=1e-6)
Module size 22 genes
NF 0.73
%ile 96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.10.59GmaAffx.93286.1.S1_atCF807610--1e-6At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeO.I.H.G.S.X.
0.9093.70.75Gma.53.1.S1_atM80664.1maturation polypeptide-2e-4At2g36640ATECP63 (EMBRYONIC CELL PROTEIN 63)O.I.H.G.S.X.
0.8993.50.73GmaAffx.43575.1.S1_atAW119723--8e+0At4g04810methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinO.I.H.G.S.X.
0.8693.00.81Gma.8489.1.S1_s_atAB030493.1thiamin biosynthetic enzyme /// thiamin biosynthetic enzyme-5e-51At5g54770THI1O.I.H.G.S.X.
0.8392.50.72Gma.2919.1.S1_atBM269717--6e-1At3g55420unknown proteinO.I.H.G.S.X.
0.8291.90.81Gma.1545.1.A1_atCD410619--8e-14At4g39330CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9)O.I.H.G.S.X.
0.8091.50.74GmaAffx.6533.1.A1_atBU550258--1e+0At5g03510zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.7890.60.72Gma.1159.1.S1_atBM527453--6e-1Atcg01000-O.I.H.G.S.X.
0.7890.60.71GmaAffx.61901.1.S1_atAW152953--1e+1At5g09440EXL4 (EXORDIUM LIKE 4)O.I.H.G.S.X.
0.7890.60.81Gma.504.1.S1_atBM525623--6e-1At5g33390glycine-rich proteinO.I.H.G.S.X.
0.7890.60.70Gma.1096.1.S1_atCD407195--4e-4At5g59310LTP4 (LIPID TRANSFER PROTEIN 4)O.I.H.G.S.X.
0.7790.30.70Gma.3033.1.S1_atBM307084--7e+0At5g41450zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7388.90.75GmaAffx.15815.1.A1_atCD409726--7e-1Atcg00820-O.I.H.G.S.X.
0.7388.90.70GmaAffx.79221.1.S1_atBU925861--8e-22At1g64110AAA-type ATPase family proteinO.I.H.G.S.X.
0.7187.80.74Gma.2935.1.S1_atBE821167--1e+0At2g27390proline-rich family proteinO.I.H.G.S.X.
0.7187.80.77GmaAffx.2351.1.S1_atAI856735--4e-1At5g19830aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.6986.80.74GmaAffx.74663.1.S1_atBU965000--2e-1At5g46290KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I)O.I.H.G.S.X.
0.6986.80.73GmaAffx.88661.1.A1_atCD413777--3e+0At1g05835unknown proteinO.I.H.G.S.X.
0.6583.80.70Gma.8490.1.S1_atAB030492.1thiamin biosynthetic enzyme-1e-51At5g54770THI1O.I.H.G.S.X.
0.6181.80.70GmaAffx.33409.1.A1_atBU547094--3e-1At4g20520RNA binding / RNA-directed DNA polymeraseO.I.H.G.S.X.
0.5576.30.69Gma.4331.2.S1_atBE658569--1e+0At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.3954.50.75GmaAffx.14927.1.S1_atBQ627487--7e-3At1g79270ECT8 (evolutionarily conserved C-terminal region 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.899.8GSM147938Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
21.499.8GSM147937Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
16.899.7GSM182034Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
16.599.6GSM182032Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
15.199.6GSM182033Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
12.699.5GSM191078Soybean_Cotyledon_SUS2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
11.899.4GSM191077Soybean_Cotyledon_SUS1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.597.7GSM147936Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.397.5GSM147933Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.796.8GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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