Co-expression analysis

Gene ID GmaAffx.93232.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g66110: metal ion binding (HF=3e-4)
Module size 26 genes
NF 0.13
%ile 33.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.89GmaAffx.93232.1.S1_atCF807296--3e-4At5g66110metal ion bindingO.I.H.G.S.X.
0.3142.20.88GmaAffx.11919.1.S1_s_atAW760869--3e+0At5g66110metal ion bindingO.I.H.G.S.X.
0.2839.00.94Gma.4040.1.S1_atBQ453872--4e-7At4g11560bromo-adjacent homology (BAH) domain-containing proteinO.I.H.G.S.X.
0.2329.90.87Gma.16308.1.A1_atU64916.1GMFP5-5e-7At5g03380heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2329.90.96GmaAffx.75881.1.S1_atAW598783--6e+0At5g22608unknown proteinO.I.H.G.S.X.
0.2126.60.96Gma.5387.1.S1_atBM093934--2e+0Atmg01400-O.I.H.G.S.X.
0.2126.60.96GmaAffx.5160.1.S1_atBM270197--6e-1At1g05720selenoprotein family proteinO.I.H.G.S.X.
0.1923.70.93GmaAffx.88892.1.S1_atCK605687--6e-15At3g10860ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.1822.30.96GmaAffx.72771.1.A1_atBG511599--4e-26At1g10240FRS11 (FAR1-related sequence 11)O.I.H.G.S.X.
0.1822.30.96Gma.6565.1.S1_atBE822672--9e-17At1g16210unknown proteinO.I.H.G.S.X.
0.1721.20.96Gma.9595.1.A1_atCD393535--3e-1At5g09940unknown proteinO.I.H.G.S.X.
0.1721.20.96GmaAffx.24872.1.S1_atCA935146--2e+0At5g04260WCRKC2 (WCRKC THIOREDOXIN 2)O.I.H.G.S.X.
0.1619.70.94GmaAffx.58360.1.A1_atBE659874--1e+1At5g08170EMB1873 (EMBRYO DEFECTIVE 1873)O.I.H.G.S.X.
0.1518.70.94GmaAffx.90297.1.S1_atCF806022--5e+0At5g434502-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.1518.70.94GmaAffx.92820.1.S1_atCF808545--2e-39At5g46630clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.1417.50.96Gma.1489.1.S1_atBU544307bZIP transcription factor bZIP21-2e-3At2g21230bZIP family transcription factorO.I.H.G.S.X.
0.1316.30.98Gma.6463.1.S1_atBQ298460--2e-23At5g10840endomembrane protein 70, putativeO.I.H.G.S.X.
0.1215.10.95GmaAffx.3641.1.S1_atBU549886transcription factor bZIP101-3e-2At1g32150bZIP transcription factor family proteinO.I.H.G.S.X.
0.1114.20.96Gma.2849.1.S1_atCD418012--1e-3At5g52240MSBP1 (membrane steroid binding protein 1)O.I.H.G.S.X.
0.1114.20.95GmaAffx.62063.1.S1_atBI427047--2e-47At5g06600UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)O.I.H.G.S.X.
0.1013.00.97Gma.11398.2.A1_s_atCD413467--2e-21At1g70490ARFA1DO.I.H.G.S.X.
0.1013.00.96Gma.10423.1.S1_atBG652066--4e+0At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.H.G.S.X.
0.0912.00.95GmaAffx.5824.1.A1_s_atBQ298207--3e+0At5g64670ribosomal protein L15 family proteinO.I.H.G.S.X.
0.0811.00.96Gma.2534.2.S1_s_atCD393721--2e-76At4g02890UBQ14O.I.H.G.S.X.
0.0710.20.97GmaAffx.478.3.S1_s_atBI941601--2e-2At4g00755F-box family proteinO.I.H.G.S.X.
0.035.80.95Gma.10691.4.S1_s_atBM523847--5e-22At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.298.6GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.198.5GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.198.5GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.998.5GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.898.4GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.598.3GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.598.3GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.298.1GSM147937Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.298.1GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.998.0GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.897.9GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.797.8GSM182032Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.797.8GSM191089Soybean_Cotyledon_OI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.797.8GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.797.8GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.697.7GSM201126Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM147954Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.497.6GSM201118Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.497.6GSM201109Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.497.6GSM147941Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.397.5GSM182034Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.397.5GSM191090Soybean_Cotyledon_OI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.397.5GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.397.5GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.397.5GSM201121Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.297.4GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.297.4GSM147943Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.297.4GSM191077Soybean_Cotyledon_SUS1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.197.3GSM182045Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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