Co-expression analysis

Gene ID GmaAffx.93082.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g48860: 3-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putative (HF=2e-14)
Module size 7 genes
NF 0.50
%ile 81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4665.50.95GmaAffx.93082.1.S1_atCF808807--2e-14At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeO.I.H.G.S.X.
0.7187.80.95GmaAffx.86805.1.S1_atAW755915--9e-2At2g24430ANAC038 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 38)O.I.H.G.S.X.
0.6382.90.95GmaAffx.90027.1.S1_s_atCF805750--7e-2At2g24430ANAC038 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 38)O.I.H.G.S.X.
0.5778.80.95GmaAffx.90530.1.S1_s_atCF806255--1e-12At1g76680OPR1O.I.H.G.S.X.
0.5374.20.95Gma.11028.2.S1_s_atCA782711--1e-14At5g14780FDH (FORMATE DEHYDROGENASE)O.I.H.G.S.X.
0.4259.30.95Gma.5165.1.S1_atBI971264--9e-3At1g03210phenazine biosynthesis PhzC/PhzF family proteinO.I.H.G.S.X.
0.3040.40.95GmaAffx.90764.1.S1_atCF805757--8e-42At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.8GSM2449164_SLO.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.396.2GSM29374578_3049.2C.SLC3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM2933199_C059.1P.SLP1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29325037_C061.1P.SLP2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29428941_3149.2I.SLI1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM24485428_SLO.I3U4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.195.8GSM29237952_C095.1F.SLF1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29370844_3049.2C.SLC3U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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