Co-expression analysis

Gene ID GmaAffx.93046.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g62520: SRO5 (SIMILAR TO RCD ONE 5) (HF=3e-1)
Module size 6 genes
NF 0.56
%ile 87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.30.95GmaAffx.93046.1.S1_atCF808771--3e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)O.I.H.G.S.X.
0.7790.30.94GmaAffx.36250.1.S1_s_atBG551078--2e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)O.I.H.G.S.X.
0.4463.30.96GmaAffx.78968.2.S1_atBM188587--9e-13At5g39670calcium-binding EF hand family proteinO.I.H.G.S.X.
0.4057.10.96GmaAffx.59154.1.S1_atBG508624--7e+0At4g37685unknown proteinO.I.H.G.S.X.
0.3650.80.96GmaAffx.87526.1.S1_atBM954581--6e+0At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)O.I.H.G.S.X.
0.2939.00.95Gma.3639.1.S1_atAB083030.1syringolide-induced protein B15-3-5-1e-4At2g38600acid phosphatase class B family proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.397.5GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.095.6GSM29248784_1251.1G.R158L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.28125.2.S1_at, orthologous to the query gene, GmaAffx.93046.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.2Ta.28125.2.S1_atAt5g62520--1e+0At3g27660OLEO4 (OLEOSIN 4)O.I.H.G.S.X.
0.6182.0Ta.28764.1.S1_s_atAt5g62520cysteine protease-7e-4At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.6081.0Ta.28764.1.S1_atAt5g62520cysteine protease-7e-4At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.5678.6Ta.18268.1.S1_atAt5g62520--7e+0At4g30370zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5072.4Ta.9605.1.A1_atAt5g62520--4e-1At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.H.G.S.X.
0.2430.3TaAffx.111174.1.S1_atAt5g62520--1e+0At1g11570nuclear transport factor 2 (NTF2), putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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