Co-expression analysis

Gene ID GmaAffx.92979.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At2g38310: unknown protein (HF=1e-12)
Module size 6 genes
NF 0.58
%ile 88.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4057.10.93GmaAffx.92979.1.S1_s_atCF808704--1e-12At2g38310unknown proteinO.I.H.G.S.X.
0.6080.70.93GmaAffx.2269.2.S1_atBQ740268--6e-11At1g13260RAV1O.I.H.G.S.X.
0.5778.80.90GmaAffx.2269.3.S1_atBM526895--1e+1At5g46877-O.I.H.G.S.X.
0.5778.80.93GmaAffx.15161.2.S1_atBF598914--8e-5At3g05675protein bindingO.I.H.G.S.X.
0.5576.30.93Gma.2389.1.S1_atBM143981--4e-23At1g05805basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.5576.30.94GmaAffx.15161.1.S1_atBQ298754--5e+0At3g43110unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.399.4GSM209592resistant_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.899.3GSM209595susceptible_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.799.3GSM209593susceptible_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.799.3GSM209575susceptible_6hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.299.2GSM209586susceptible_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.199.2GSM209585resistant_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.899.1GSM209583resistant_6hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.899.1GSM209574resistant_6hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.499.1GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.499.1GSM209594resistant_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.199.0GSM209578resistant_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.199.0GSM209584susceptible_6hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.998.8GSM209573mock_0hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.998.8GSM209577susceptible_12hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.598.7GSM209579susceptible_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.998.5GSM209576resistant_12hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.897.9GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.797.8GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.697.7GSM209588susceptible_24hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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