Co-expression analysis

Gene ID	GmaAffx.92861.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g20693: HMGB2 (HIGH MOBILITY GROUP B 2) (HF=8e-2)
Module size	6 genes
NF	0.47
%ile	77.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.98	GmaAffx.92861.1.S1_s_at	CF808586	-	-	8e-2	At1g20693	HMGB2 (HIGH MOBILITY GROUP B 2)	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.98	GmaAffx.24666.1.S1_at	CA783210	-	-	2e-1	At2g39705	RTFL8 (ROTUNDIFOLIA LIKE 8)	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	Gma.11341.3.S1_s_at	BM177332	-	-	8e-26	At4g17900	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	PsAffx.psHA006iH10r_s_at	PsAffx.psHA006iH10r	-	-	1e+0	At2g28140	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.58176.1.S1_at	BU577254	-	-	3e-1	At2g39540	gibberellin-regulated family protein	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	GmaAffx.65140.1.S1_at	BI700031	-	-	7e-2	At4g33670	L-galactose dehydrogenase (L-GalDH)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.56445.1.S1_x_at, orthologous to the query gene, GmaAffx.92861.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	TaAffx.56445.1.S1_x_at	At1g20693	-	-	4e-1	At3g20600	NDR1 (non race-specific disease resistance 1)	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.2615.1.S1_x_at	At1g20693	-	-	2e-8	At1g67785	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	Ta.2615.3.S1_x_at	At1g20693	-	-	2e-8	At1g67785	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	Ta.1892.1.S1_at	At1g20693	Vacuolar ATPase subunit G	-	2e-6	At4g23710	VAG2	O.I.	H.G.	S.X.	Please select
0.22	27.1	Ta.23196.1.S1_x_at	At1g20693	-	-	3e-4	At4g34490	ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.08	9.4	Ta.1789.1.S1_at	At1g20693	-	-	4e-7	At1g15120	ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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