Co-expression analysis

Gene ID	GmaAffx.92802.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g75440: UBC16 (ubiquitin-conjugating enzyme 16) (HF=8e-33)
Module size	6 genes
NF	0.55
%ile	85.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.92802.1.S1_s_at	CF806550	-	-	8e-33	At1g75440	UBC16 (ubiquitin-conjugating enzyme 16)	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.99	Gma.6207.1.S1_s_at	CF922738	-	-	7e-16	At4g19640	ARA7	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.99	Gma.17436.1.S1_at	CD397773	-	-	4e-23	At4g36450	ATMPK14 (Mitogen-activated protein kinase 14)	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.99	GmaAffx.8999.1.S1_at	CD403960	-	-	1e-32	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.99	GmaAffx.90193.1.S1_s_at	CF805918	-	-	8e-21	At4g31170	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.99	Gma.15387.1.S1_s_at	CD399274	-	-	8e-55	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.8171.2.A1_a_at, orthologous to the query gene, GmaAffx.92802.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	92.6	PtpAffx.8171.2.A1_a_at	At1g75440	hypothetical protein	-	2e-24	At1g75440	UBC16 (ubiquitin-conjugating enzyme 16)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.73	93.6	PtpAffx.4170.4.A1_at	At1g75440	hypothetical protein	-	2e-37	At1g05805	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	Ptp.3117.1.A1_at	At1g75440	hypothetical protein	-	5e-16	At3g21865	PEX22 (peroxin 22)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	PtpAffx.5590.2.S1_at	At1g75440	hypothetical protein	-	3e-17	At1g30825	DIS2 (DISTORTED TRICHOMES 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	Ptp.4859.2.A1_s_at	At1g75440	hypothetical protein	-	1e-34	At5g67220	nitrogen regulation family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	PtpAffx.53545.1.S1_at	At1g75440	hypothetical protein	-	4e-27	At1g04850	ubiquitin-associated (UBA)/TS-N domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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