Co-expression analysis

Gene ID GmaAffx.92802.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g75440: UBC16 (ubiquitin-conjugating enzyme 16) (HF=8e-33)
Module size 6 genes
NF 0.55
%ile 85.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99GmaAffx.92802.1.S1_s_atCF806550--8e-33At1g75440UBC16 (ubiquitin-conjugating enzyme 16)O.I.H.G.S.X.
0.8091.50.99Gma.6207.1.S1_s_atCF922738--7e-16At4g19640ARA7O.I.H.G.S.X.
0.5778.80.99Gma.17436.1.S1_atCD397773--4e-23At4g36450ATMPK14 (Mitogen-activated protein kinase 14)O.I.H.G.S.X.
0.5576.30.99GmaAffx.8999.1.S1_atCD403960--1e-32At5g25760PEX4 (PEROXIN4)O.I.H.G.S.X.
0.2939.00.99GmaAffx.90193.1.S1_s_atCF805918--8e-21At4g31170protein kinase family proteinO.I.H.G.S.X.
0.2633.90.99Gma.15387.1.S1_s_atCD399274--8e-55At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os12g0636800, orthologous to the query gene, GmaAffx.92802.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7189.6Os12g0636800At1g75440-Ubiquitin-conjugating enzyme 18 (Fragment)5e-13At5g42990UBC18 (ubiquitin-conjugating enzyme 18)O.I.H.G.S.X.
0.7391.1Os03g0742400At1g75440-MRS2-76e-26At5g64560magnesium transporter CorA-like family protein (MRS2-2)O.I.H.G.S.X.
0.4355.4Os01g0338200At1g75440-Mov34/MPN/PAD-1 family protein1e+0At4g16144-O.I.H.G.S.X.
0.3644.0Os01g0141100At1g75440-ATPase of the AAA+ class4e-52At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)O.I.H.G.S.X.
0.3541.7Os03g0120300At1g75440-THH15e-14At1g14530THH1 (TOM THREE HOMOLOG 1)O.I.H.G.S.X.
0.2931.1Os09g0281700At1g75440-Ras-related protein RGP1 (GTP-binding regulatoryprotein RGP1)1e-17At5g47960ATRABA4CO.I.H.G.S.X.
0.2727.5Os03g0681400At1g75440-Ubiquitin-conjugating enzymes domain containingprotein1e-13At5g42990UBC18 (ubiquitin-conjugating enzyme 18)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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