Co-expression analysis

Gene ID	GmaAffx.92477.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g47550: pectinesterase family protein (HF=4e-7)
Module size	8 genes
NF	0.49
%ile	80.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	82.9	0.71	GmaAffx.92477.1.S1_at	CF808202	-	-	4e-7	At2g47550	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.72	GmaAffx.31312.1.A1_s_at	BU548315	-	-	7e-2	At4g26080	ABI1 (ABA INSENSITIVE 1)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.81	GmaAffx.73180.1.S1_at	BI700322	-	-	8e-5	At4g00190	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.85	GmaAffx.13988.1.S1_s_at	BI700279	-	-	1e-2	At3g52920	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.92	GmaAffx.59606.1.S1_at	BI787321	-	-	3e+0	At3g46020	RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.83	GmaAffx.77643.1.S1_at	BQ576397	-	-	2e+0	At4g17030	ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.79	GmaAffx.69548.1.S1_s_at	BQ630736	-	-	5e-6	At2g47550	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.91	GmaAffx.93403.1.A1_s_at	CF809128	-	-	1e+0	At2g20260	PSAE-2 (photosystem I subunit E-2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.3	99.3	GSM293025	2_C027.1N.V7N2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.2	99.3	GSM294323	72_3157.2I.V7I3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.9	99.3	GSM292314	62_C083.1E.V7E2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.2	99.2	GSM294605	72_3201.2L.V7L1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.8	99.1	GSM293192	74_C041.1O.V7O1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.0	99.0	GSM293249	36_C055.1P.V7P1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.9	98.8	GSM293035	39_C023.1N.V7N1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8	98.7	GSM293705	41_3047.2C.V7C2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.6	98.7	GSM294028	79_3099.2F.V7F2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.6	98.7	GSM292289	36_C081.1E.SLE2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.6	98.7	GSM244934	9_SLO.I2W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.5	98.7	GSM244910	40_SLO.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.4	98.6	GSM292302	49_C073.1E.V7E1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1	98.5	GSM244928	7_V71.I2W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.1	98.5	GSM294292	44_3155.2I.V7I2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9	98.5	GSM294382	41_3165.2J.V7J1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.8	98.4	GSM244791	13_SLO.I2W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.7	98.4	GSM294216	67_3129.2H.V7H1L_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM244778	10_CON.I2W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.4	98.2	GSM294158	22_3133.2H.V7H2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM244890	36_SLO.I2W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.0	98.0	GSM292388	62_C107.1F.V7F3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM294675	46_3217.2M.V7M1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM244811	18_SLO.I3L2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.5	97.7	GSM294417	73_3171.2J.V7J2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293232	20_C071.1P.V7P3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM244874	32_CON.I2W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.2	97.4	GSM293510	28_3011.2A.V7A2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM292189	4_C007.1A.V7A2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM293715	50_3037.2C.V7C1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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