Co-expression analysis

Gene ID GmaAffx.92473.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At3g01360: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.52
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99GmaAffx.92473.1.S1_s_atCF809138--1e+0At3g01360unknown proteinO.I.H.G.S.X.
0.6080.70.99GmaAffx.22482.1.S1_atAW185059--1e-28At3g46460UBC13 (ubiquitin-conjugating enzyme 13)O.I.H.G.S.X.
0.5374.20.98Gma.10261.1.S1_atBG839311--2e-52At3g27090-O.I.H.G.S.X.
0.5374.20.99GmaAffx.22482.1.S1_x_atAW185059--1e-28At3g46460UBC13 (ubiquitin-conjugating enzyme 13)O.I.H.G.S.X.
0.3346.10.98Gma.3735.3.S1_s_atBU764012--1e-67At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)O.I.H.G.S.X.
0.2025.10.99GmaAffx.34491.1.S1_atBE820865--9e-13At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM29289065_C202.1L.R9L1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.17687.1.S1_at, orthologous to the query gene, GmaAffx.92473.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4658.4Zm.17687.1.S1_atAt3g01360--2e-1At1g30972-O.I.H.G.S.X.
0.5775.1Zm.697.1.A1_a_atAt3g01360histidine kinase 3-1e-17At5g35750AHK2 (ARABIDOPSIS HISTIDINE KINASE 2)O.I.H.G.S.X.
0.5571.6Zm.6684.1.S1_x_atAt3g0136060S ribosomal protein L29-4e-19At3g0670060S ribosomal protein L29 (RPL29A)O.I.H.G.S.X.
0.5369.1Zm.236.1.S1_atAt3g01360SBP-domain protein2-1e-2At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)O.I.H.G.S.X.
0.5065.7Zm.7713.1.A1_atAt3g01360--1e+0At2g05635ATP binding / ATP-dependent DNA helicase/ DNA bindingO.I.H.G.S.X.
0.3945.6Zm.12634.4.S1_a_atAt3g0136060S ribosomal protein L23-8e-61At1g0448060S ribosomal protein L23 (RPL23A)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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