Co-expression analysis

Gene ID	GmaAffx.92473.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At3g01360: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.52
%ile	83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.92473.1.S1_s_at	CF809138	-	-	1e+0	At3g01360	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.99	GmaAffx.22482.1.S1_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	Gma.10261.1.S1_at	BG839311	-	-	2e-52	At3g27090	-	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.99	GmaAffx.22482.1.S1_x_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.3735.3.S1_s_at	BU764012	-	-	1e-67	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.99	GmaAffx.34491.1.S1_at	BE820865	-	-	9e-13	At1g16360	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	95.6	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

A co-expression module including the grape gene, 1606989_at, orthologous to the query gene, GmaAffx.92473.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	1606989_at	At3g01360	similar to putative protein	-	3e-4	At5g01350	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	94.6	1614352_at	At3g01360	hypothetical protein LOC100244495	-	2e-15	At5g42000	ORMDL family protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	1615601_at	At3g01360	hypothetical protein LOC100265898	-	5e-9	At4g02370	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	1608047_at	At3g01360	hypothetical protein LOC100267805	-	1e-5	At3g10260	reticulon family protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	1606431_at	At3g01360	hypothetical protein LOC100242612	-	6e-1	At3g26980	MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.31	41.3	1610542_at	At3g01360	hypothetical protein LOC100254379	-	8e-83	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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