Co-expression analysis

Gene ID	GmaAffx.92473.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At3g01360: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.52
%ile	83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.92473.1.S1_s_at	CF809138	-	-	1e+0	At3g01360	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.99	GmaAffx.22482.1.S1_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	Gma.10261.1.S1_at	BG839311	-	-	2e-52	At3g27090	-	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.99	GmaAffx.22482.1.S1_x_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.3735.3.S1_s_at	BU764012	-	-	1e-67	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.99	GmaAffx.34491.1.S1_at	BE820865	-	-	9e-13	At1g16360	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	95.6	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.16450.1.S1_a_at, orthologous to the query gene, GmaAffx.92473.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	74.6	PtpAffx.16450.1.S1_a_at	At3g01360	hypothetical protein	-	4e-1	At1g48240	ATNPSN12	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	PtpAffx.203886.1.S1_at	At3g01360	hypothetical protein	-	3e-5	At1g28250	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	PtpAffx.24512.1.S1_at	At3g01360	hypothetical protein	-	7e-41	At4g14950	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	PtpAffx.32103.1.S1_a_at	At3g01360	hypothetical protein	-	4e-30	At4g01610	cathepsin B-like cysteine protease, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	PtpAffx.85164.1.S1_at	At3g01360	hypothetical protein	-	1e-2	At1g22140	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	PtpAffx.86248.1.A1_a_at	At3g01360	hypothetical protein	-	9e-24	At1g33490	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	PtpAffx.51059.1.A1_at	At3g01360	hypothetical protein	-	3e-1	At4g16580	catalytic	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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