Co-expression analysis

Gene ID GmaAffx.92473.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At3g01360: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.52
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99GmaAffx.92473.1.S1_s_atCF809138--1e+0At3g01360unknown proteinO.I.H.G.S.X.
0.6080.70.99GmaAffx.22482.1.S1_atAW185059--1e-28At3g46460UBC13 (ubiquitin-conjugating enzyme 13)O.I.H.G.S.X.
0.5374.20.98Gma.10261.1.S1_atBG839311--2e-52At3g27090-O.I.H.G.S.X.
0.5374.20.99GmaAffx.22482.1.S1_x_atAW185059--1e-28At3g46460UBC13 (ubiquitin-conjugating enzyme 13)O.I.H.G.S.X.
0.3346.10.98Gma.3735.3.S1_s_atBU764012--1e-67At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)O.I.H.G.S.X.
0.2025.10.99GmaAffx.34491.1.S1_atBE820865--9e-13At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM29289065_C202.1L.R9L1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os01g0348900, orthologous to the query gene, GmaAffx.92473.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5978.0Os01g0348900At3g01360-Jacalin-related lectin domain containing protein2e+0At1g0108033 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putativeO.I.H.G.S.X.
0.149.3Os03g0231600At3g01360-Branched-chain-amino-acid aminotransferase 3,chloroplast precursor (EC 2.6.1.42) (Atbcat-3)2e-1At3g49680BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)O.I.H.G.S.X.
0.105.7Os11g0113700At3g01360-Protein kinase domain containing protein2e-11At5g58380SIP1 (SOS3-INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.031.4Os11g0605500At3g01360-Acyl-CoA oxidase2e-20At5g65110ACX2 (ACYL-COA OXIDASE 2)O.I.H.G.S.X.
0.021.0Os04g0560700At3g01360-Conserved hypothetical protein3e+0At3g53630unknown proteinO.I.H.G.S.X.
0.021.0Os05g0125500At3g01360-Isovaleryl-CoA dehydrogenase, mitochondrialprecursor (EC 1.3.99.10) (IVD)1e-26At3g45300IVD (ISOVALERYL-COA-DEHYDROGENASE)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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