Co-expression analysis

Gene ID	GmaAffx.92473.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At3g01360: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.52
%ile	83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.92473.1.S1_s_at	CF809138	-	-	1e+0	At3g01360	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.99	GmaAffx.22482.1.S1_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	Gma.10261.1.S1_at	BG839311	-	-	2e-52	At3g27090	-	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.99	GmaAffx.22482.1.S1_x_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.3735.3.S1_s_at	BU764012	-	-	1e-67	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.99	GmaAffx.34491.1.S1_at	BE820865	-	-	9e-13	At1g16360	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	95.6	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

A co-expression module including the barley gene, Contig10136_s_at, orthologous to the query gene, GmaAffx.92473.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	Contig10136_s_at	At3g01360	-	-	7e-2	At5g01350	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	61.0	Contig10539_at	At3g01360	-	-	5e-14	At1g10210	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1)	O.I.	H.G.	S.X.	Please select
0.40	53.1	HW08B16u_s_at	At3g01360	-	-	8e+0	At5g19760	dicarboxylate/tricarboxylate carrier (DTC)	O.I.	H.G.	S.X.	Please select
0.23	26.1	HS18F13u_s_at	At3g01360	-	-	2e-1	At5g03130	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	22.6	Contig2877_at	At3g01360	-	-	6e-1	At4g19270	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	16.9	Contig12707_at	At3g01360	-	-	3e-1	At4g35980	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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