Co-expression analysis

Gene ID GmaAffx.92300.1.S1_s_at
Gene name Chorismate synthase
Homology with ArabidopsisSimilar to At1g48850: EMB1144 (embryo defective 1144) (HF=5e-50)
Module size 6 genes
NF 0.52
%ile 83.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.90.97GmaAffx.92300.1.S1_s_atCF807658Chorismate synthase-5e-50At1g48850EMB1144 (embryo defective 1144)O.I.H.G.S.X.
0.6786.10.98Gma.4269.3.S1_a_atCA784404--3e-19At1g27450APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)O.I.H.G.S.X.
0.6080.70.98Gma.4269.2.S1_a_atBU083811--8e-17At1g27450APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)O.I.H.G.S.X.
0.3853.30.98GmaAffx.88920.1.S1_s_atCK605763--3e-60At1g65930isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.3650.80.98GmaAffx.86175.2.S1_atBI471498--2e-2At1g09490cinnamyl-alcohol dehydrogenase family / CAD familyO.I.H.G.S.X.
0.3346.10.97Gma.1288.2.S1_a_atBE473596--2e-1At2g22250aminotransferase class I and II family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM2449164_SLO.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.095.6GSM17168630_V.F.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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