Co-expression analysis

Gene ID GmaAffx.92278.1.S1_s_at
Gene name 6-phosphogluconate dehydrogenase
Homology with ArabidopsisSimilar to At3g02360: 6-phosphogluconate dehydrogenase family protein (HF=4e-74)
Module size 8 genes
NF 0.73
%ile 96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4158.10.97GmaAffx.92278.1.S1_s_atCF8080036-phosphogluconate dehydrogenase-4e-74At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.8893.40.97Gma.15492.1.S1_s_atAF276302.1chalcone isomerase-2e+0At1g52510hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.8693.00.98Gma.4300.1.S1_s_atS46989.1chalcone synthase-5e-29At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.8693.00.98Gma.4300.3.S1_s_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.8091.50.98GmaAffx.37677.1.S1_s_atBE022626HIDH mRNA for 2-hydroxyisoflavanone dehydratase-3e-1At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.7890.60.98Gma.4300.3.S1_x_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.6786.10.97GmaAffx.92722.1.S1_atCF8075612-hydroxyisoflavanone dehydratase-6e-1At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.6382.90.97GmaAffx.91944.1.S1_s_atCF808330NAD(P)H dependent 6'-deoxychalcone synthase-4e-2At4g37690galactosyl transferase GMA12/MNN10 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29355367_3017.2A.R9A3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.406.2.A1_a_at, orthologous to the query gene, GmaAffx.92278.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8294.6Zm.406.2.A1_a_atAt3g02360NADPH producing dehydrogenase of the oxidative pentose phosphate pathway-1e-12At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.4759.9Zm.14498.2.A1_atAt3g02360--2e-4At1g26770ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10)O.I.H.G.S.X.
0.4658.4Zm.2935.1.A1_atAt3g02360hypothetical protein LOC100193640-1e-3At3g01950unknown proteinO.I.H.G.S.X.
0.4352.8Zm.4914.1.S1_atAt3g02360--8e-4At5g49330AtMYB111 (myb domain protein 111)O.I.H.G.S.X.
0.4251.3Zm.9803.1.A1_atAt3g02360--1e+0At1g64740TUA1 (ALPHA-1 TUBULIN)O.I.H.G.S.X.
0.4251.3Zm.10067.1.A1_atAt3g02360--7e-1At2g18700ATTPS11O.I.H.G.S.X.
0.4048.5Zm.6812.1.A1_s_atAt3g02360--5e+0At4g30880protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3844.2Zm.2220.4.A1_a_atAt3g02360Hypothetical protein LOC100216733-1e-1At5g16500protein kinase family proteinO.I.H.G.S.X.
0.3538.9Zm.5226.1.A1_atAt3g02360--3e+0At2g03440nodulin-relatedO.I.H.G.S.X.
0.3233.4Zm.2833.1.S1_s_atAt3g02360protein ABIL1-2e-1At3g53670unknown proteinO.I.H.G.S.X.
0.3029.8Zm.6530.1.A1_atAt3g02360MYB-CC type transfactor-4e-18At2g01060myb family transcription factorO.I.H.G.S.X.
0.2115.5Zm.9648.1.A1_atAt3g02360plant-specific domain TIGR01615 family protein-4e+0At4g03965protein binding / zinc ion bindingO.I.H.G.S.X.
0.2115.5Zm.4927.1.A1_atAt3g02360--6e+0At5g05930guanylyl cyclase-related (GC1)O.I.H.G.S.X.
0.1912.8Zm.18933.2.A1_atAt3g02360--2e-2At2g34190xanthine/uracil permease family proteinO.I.H.G.S.X.
0.1811.6Zm.6844.1.S1_atAt3g02360hypothetical protein LOC100280071-4e-8At5g36890BGLU42 (BETA GLUCOSIDASE 42)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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