Co-expression analysis

Gene ID GmaAffx.92278.1.S1_s_at
Gene name 6-phosphogluconate dehydrogenase
Homology with ArabidopsisSimilar to At3g02360: 6-phosphogluconate dehydrogenase family protein (HF=4e-74)
Module size 8 genes
NF 0.73
%ile 96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4158.10.97GmaAffx.92278.1.S1_s_atCF8080036-phosphogluconate dehydrogenase-4e-74At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.8893.40.97Gma.15492.1.S1_s_atAF276302.1chalcone isomerase-2e+0At1g52510hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.8693.00.98Gma.4300.1.S1_s_atS46989.1chalcone synthase-5e-29At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.8693.00.98Gma.4300.3.S1_s_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.8091.50.98GmaAffx.37677.1.S1_s_atBE022626HIDH mRNA for 2-hydroxyisoflavanone dehydratase-3e-1At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.7890.60.98Gma.4300.3.S1_x_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.
0.6786.10.97GmaAffx.92722.1.S1_atCF8075612-hydroxyisoflavanone dehydratase-6e-1At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.6382.90.97GmaAffx.91944.1.S1_s_atCF808330NAD(P)H dependent 6'-deoxychalcone synthase-4e-2At4g37690galactosyl transferase GMA12/MNN10 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29355367_3017.2A.R9A3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os06g0111500, orthologous to the query gene, GmaAffx.92278.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7692.2Os06g0111500At3g02360-Cytosolic 6-phosphogluconate dehydrogenase1e-58At3g023606-phosphogluconate dehydrogenase family proteinO.I.H.G.S.X.
0.6887.5Os06g0662000At3g02360-Vacuolar ATP synthase catalytic subunit A (EC3.6.3.14) (V-ATPase A subunit) (Vacuolar proton pumpalpha subunit) (V-ATPase 69 kDa subunit)0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.6382.7Os11g0169900At3g02360-Vacuolar ATP synthase 16 kDa proteolipid subunit(EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit)(Fragment)4e-63At1g75630AVA-P4O.I.H.G.S.X.
0.5777.0Os12g0168900At3g02360--4e-51At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)O.I.H.G.S.X.
0.5676.3Os05g0593100At3g02360-Vacuolar ATP synthase subunit C (EC 3.6.3.14)(V-ATPase C subunit) (Vacuolar proton pump C subunit)2e-10At1g12840DET3 (DE-ETIOLATED 3)O.I.H.G.S.X.
0.5573.7Os01g0587000At3g02360-Vacuolar ATP synthase subunit d (EC 3.6.3.14)(V-ATPase d subunit) (Vacuolar proton pump d subunit)(V-ATPase 41 KDa accessory protein) (DVA41)2e-75At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.5573.7Os10g0184300At3g02360-Hypothetical protein1e-28At4g39080VHA-A3 (VACUOLAR PROTON ATPASE A3)O.I.H.G.S.X.
0.5269.6Os01g0610100At3g02360-Vacuolar ATP synthase 21 kDa proteolipid subunit(EC 3.6.3.14) (23-kDa subunit of V-ATPase)4e-23At2g25610H+-transporting two-sector ATPase, C subunit family proteinO.I.H.G.S.X.
0.5168.7Os07g0549700At3g02360-ARM repeat fold domain containing protein1e-12At3g42050vacuolar ATP synthase subunit H family proteinO.I.H.G.S.X.
0.5068.0Os06g0115100At3g02360--4e+0At5g66005Expressed proteinO.I.H.G.S.X.
0.5068.0Os05g0418000At3g02360-GDP dissociation inhibitor protein OsGDI18e-32At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)O.I.H.G.S.X.
0.4660.9Os02g0586400At3g02360-Small GTP binding protein Rab27e-87At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)O.I.H.G.S.X.
0.4660.9Os02g0697300At3g02360-VHS domain containing protein2e-14At5g16880VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.S.X.
0.4355.4Os05g0420600At3g02360-Cytochrome c2e-24At1g22840CYTC-1 (CYTOCHROME C-1)O.I.H.G.S.X.
0.3846.9Os02g0718900At3g02360-ADP,ATP carrier protein, mitochondrial precursor(ADP/ATP translocase) (Adenine nucleotide translocator)(ANT)4e-151At5g13490AAC2 (ADP/ATP carrier 2)O.I.H.G.S.X.
0.3644.0Os03g0772800At3g02360-Cytochrome c oxidase, subunit VIa family protein1e-3At4g37830cytochrome c oxidase-relatedO.I.H.G.S.X.
0.3440.0Os05g0402300At3g02360-Protein of unknown function UPF0005 family protein9e-3At4g15470-O.I.H.G.S.X.
0.3236.3Os11g0455500At3g02360-Adenosylhomocysteinase (EC 3.3.1.1)(S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)8e-171At4g13940MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)O.I.H.G.S.X.
0.2931.1Os06g0152100At3g02360-Profilin 28e-15At2g19760PRF1 (PROFILIN 1)O.I.H.G.S.X.
0.2831.1Os01g0654500At3g02360-NADP-isocitrate dehydrogenase2e-78At1g65930isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.2625.6Os10g0320400At3g02360-ATP synthase gamma chain, mitochondrial precursor(EC 3.6.3.14)1e-48At2g33040ATP synthase gamma chain, mitochondrial (ATPC)O.I.H.G.S.X.
0.2625.6Os03g0237000At3g02360-Nonaspanin (TM9SF) family protein3e-47At1g14670endomembrane protein 70, putativeO.I.H.G.S.X.
0.149.3Os07g0691800At3g02360-26S proteasome subunit 4-like protein (26Sproteasome subunit AtRPT2a)7e-100At2g2014026S protease regulatory complex subunit 4, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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