Co-expression analysis

Gene ID	GmaAffx.92182.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g69800: CBS domain-containing protein (HF=9e-1)
Module size	7 genes
NF	0.63
%ile	91.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	93.0	0.99	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.99	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.99	GmaAffx.91113.1.S1_s_at	CF806834	-	-	1e-31	At4g23460	beta-adaptin, putative	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.99	GmaAffx.29121.1.S1_at	BU762958	-	-	1e+0	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.99	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.99	GmaAffx.92886.1.S1_s_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.17708.1.S1_at, orthologous to the query gene, GmaAffx.92182.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	94.6	Zm.17708.1.S1_at	At1g69800	-	-	3e-1	At3g55460	SCL30	O.I.	H.G.	S.X.	Please select
0.83	95.6	Zm.2315.1.A1_at	At1g69800	nodulin-like protein	-	4e-4	At3g18200	nodulin MtN21 family protein	O.I.	H.G.	S.X.	Please select
0.78	92.5	Zm.13362.1.S1_at	At1g69800	calmodulin binding protein	-	3e-1	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	O.I.	H.G.	S.X.	Please select
0.73	89.9	Zm.2459.1.S1_at	At1g69800	hypothetical protein LOC100274521	-	1e+0	At3g12370	ribosomal protein L10 family protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	Zm.2318.1.A1_at	At1g69800	-	-	9e-1	At1g23710	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	Zm.1604.1.S1_at	At1g69800	-	-	4e+0	At5g05650	-	O.I.	H.G.	S.X.	Please select
0.55	71.6	Zm.12657.1.A1_at	At1g69800	-	-	1e-1	At1g11580	PMEPCRA (METHYLESTERASE PCR A)	O.I.	H.G.	S.X.	Please select
0.55	71.6	Zm.16211.1.S1_at	At1g69800	-	-	2e+0	At2g25590	agenet domain-containing protein	O.I.	H.G.	S.X.	Please select
0.54	69.8	Zm.1737.2.S1_at	At1g69800	-	-	8e-1	At1g15140	oxidoreductase NAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	ZmAffx.406.11.S1_at	At1g69800	-	-	3e+0	At1g57630	disease resistance protein (TIR class), putative	O.I.	H.G.	S.X.	Please select
0.47	59.9	ZmAffx.212.1.A1_at	At1g69800	-	-	3e+0	At5g21010	ATBPM5 (BTB-POZ and MATH domain 5)	O.I.	H.G.	S.X.	Please select
0.45	56.4	Zm.4021.1.A1_at	At1g69800	hypothetical protein LOC100217057	-	7e-1	At5g62610	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	Zm.3442.1.A1_at	At1g69800	hypothetical protein LOC100273117	-	9e-9	At1g06680	PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1)	O.I.	H.G.	S.X.	Please select
0.39	45.6	Zm.17441.1.A1_at	At1g69800	-	-	5e-1	At5g06910	ATJ6 (Arabidopsis J-domain protein 6)	O.I.	H.G.	S.X.	Please select
0.38	44.2	Zm.17690.2.A1_a_at	At1g69800	dirigent-like protein	-	1e+0	At4g18070	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	37.2	Zm.18099.1.A1_at	At1g69800	hypothetical protein LOC100216597	-	2e-3	At5g48560	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	Zm.2240.1.A1_at	At1g69800	hypothetical protein LOC100194242	-	3e-6	At2g40830	RHC1A	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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