Co-expression analysis

Gene ID GmaAffx.92182.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g69800: CBS domain-containing protein (HF=9e-1)
Module size 7 genes
NF 0.63
%ile 91.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8693.00.99GmaAffx.92182.1.S1_s_atCF807907--9e-1At1g69800CBS domain-containing proteinO.I.H.G.S.X.
0.6786.10.99Gma.7528.2.S1_atBM891312--3e-49At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)O.I.H.G.S.X.
0.6181.80.99GmaAffx.91113.1.S1_s_atCF806834--1e-31At4g23460beta-adaptin, putativeO.I.H.G.S.X.
0.5576.30.99GmaAffx.29121.1.S1_atBU762958--1e+0At4g17310unknown proteinO.I.H.G.S.X.
0.4766.60.99Gma.5720.2.S1_a_atBG652626--2e-5At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.4463.30.99GmaAffx.90621.1.S1_s_atCF806346--4e-50At2g21270ubiquitin fusion degradation UFD1 family proteinO.I.H.G.S.X.
0.4360.60.99GmaAffx.92886.1.S1_s_atCF808611--3e-41At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.9845.2.A1_at, orthologous to the query gene, GmaAffx.92182.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7393.6PtpAffx.9845.2.A1_atAt1g69800--4e+0At4g25433peptidoglycan-binding LysM domain-containing proteinO.I.H.G.S.X.
0.3153.7PtpAffx.83353.1.A1_atAt1g69800hypothetical protein-9e-8At3g62080SNF7 family proteinO.I.H.G.S.X.
0.1016.3PtpAffx.139172.1.S1_atAt1g69800hypothetical protein-2e-5At3g59690IQD13 (IQ-domain 13)O.I.H.G.S.X.
0.046.9PtpAffx.5430.4.S1_a_atAt1g69800hypothetical protein-4e-116At1g19910AVA-P2O.I.H.G.S.X.
0.023.6Ptp.659.1.S1_s_atAt1g69800hypothetical protein-5e-14At3g12800SDRB (SHORT-CHAIN DEHYDROGENASE-REDUCTASE B)O.I.H.G.S.X.
0.012.2PtpAffx.52166.1.A1_atAt1g69800hypothetical protein-5e+0At5g46115unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage