Co-expression analysis

Gene ID	GmaAffx.92182.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g69800: CBS domain-containing protein (HF=9e-1)
Module size	7 genes
NF	0.63
%ile	91.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	93.0	0.99	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.99	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.99	GmaAffx.91113.1.S1_s_at	CF806834	-	-	1e-31	At4g23460	beta-adaptin, putative	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.99	GmaAffx.29121.1.S1_at	BU762958	-	-	1e+0	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.99	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.99	GmaAffx.92886.1.S1_s_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig25138_at, orthologous to the query gene, GmaAffx.92182.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	72.0	Contig25138_at	At1g69800	-	-	3e+0	At1g19740	ATP-dependent protease La (LON) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.91	98.1	Contig25106_at	At1g69800	-	-	4e+0	At5g64990	AtRABH1a (Arabidopsis Rab GTPase homolog H1a)	O.I.	H.G.	S.X.	Please select
0.67	84.7	Contig18315_at	At1g69800	-	-	3e-8	At2g18770	signal recognition particle binding	O.I.	H.G.	S.X.	Please select
0.63	80.3	Contig19129_at	At1g69800	-	-	2e+0	At1g62250	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	Contig23295_at	At1g69800	-	-	5e+0	At3g10720	pectinesterase, putative	O.I.	H.G.	S.X.	Please select
0.50	66.9	Contig20268_at	At1g69800	-	-	4e-1	At5g12140	ATCYS1 (A. thaliana cystatin-1)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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