Co-expression analysis

Gene ID	GmaAffx.91659.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At3g49430: SRp34a (Ser/Arg-rich protein 34a) (HF=5e-29)
Module size	31 genes
NF	0.37
%ile	65.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.8	0.98	GmaAffx.91659.1.S1_s_at	CF807384	-	-	5e-29	At3g49430	SRp34a (Ser/Arg-rich protein 34a)	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	GmaAffx.85246.2.S1_at	BM954924	-	-	2e-9	At5g14250	COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	GmaAffx.68425.1.S1_at	BI425905	-	-	1e-35	At3g57650	LPAT2	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.99	GmaAffx.87598.1.S1_at	BM524947	-	-	8e-1	At2g13125	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.63282.1.S1_at	BG042411	-	-	2e-10	At5g40490	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.16282.4.S1_a_at	AW234404	-	-	1e-20	At1g43190	polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	GmaAffx.78964.1.S1_at	AW201648	-	-	1e-3	At3g52660	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.88112.1.S1_at	AW185398	-	-	2e-9	At3g09180	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.39028.1.S1_at	BF598446	-	-	4e-8	At4g26000	PEP (PEPPER)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.9743.1.S1_at	CB063532	-	-	8e-8	At5g61970	signal recognition particle-related / SRP-related	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	Gma.5672.9.S1_at	AW781478	-	-	2e-102	At1g54270	EIF4A-2	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.68394.1.S1_at	BU082577	-	-	3e+0	At5g03660	unknown protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	Gma.6579.2.S1_at	AW233874	-	-	2e-8	At5g28220	binding	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	Gma.7498.3.S1_at	CA800433	-	-	4e-71	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.6104.2.S1_a_at	BI320811	-	-	3e-20	At5g63260	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.5219.1.S1_at	BI970214	-	-	1e-23	At1g69380	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	Gma.13169.1.S1_at	BU084294	-	-	1e-48	At3g01150	PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.99	GmaAffx.91748.1.S1_s_at	CF807473	-	-	1e-102	At2g01970	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	Gma.18012.1.S1_at	BM568411	-	-	8e-28	At4g36690	ATU2AF65A	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	Gma.17924.2.S1_at	BF071644	-	-	2e-14	At5g17440	LUC7 N_terminus domain-containing protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.58610.1.S1_at	BF066199	-	-	1e-2	At3g49430	SRp34a (Ser/Arg-rich protein 34a)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.99	GmaAffx.29121.1.S1_at	BU762958	-	-	1e+0	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.80601.1.S1_at	AW308939	-	-	3e-31	At3g10640	VPS60.1	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.82078.1.S1_at	BI424683	-	-	1e-27	At3g26420	ATRZ-1A	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.99	Gma.3084.2.S1_a_at	BU081126	-	-	1e+0	At2g24395	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	Gma.12030.3.S1_a_at	BG359479	-	-	4e+0	At3g47341	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.99	Gma.7065.1.S1_at	BQ297832	-	-	1e-7	At1g54080	oligouridylate-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.48770.1.S1_at	BG046039	-	-	5e-50	At1g18070	EF-1-alpha-related GTP-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	Gma.3839.1.S1_at	CD391787	-	-	2e-69	At1g60780	HAP13 (HAPLESS 13)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	GmaAffx.92769.1.S1_s_at	CF808494	-	-	1e-75	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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