Co-expression analysis

Gene ID	GmaAffx.91636.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g57870: ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42) (HF=3e-63)
Module size	13 genes
NF	0.58
%ile	88.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.98	GmaAffx.91636.1.S1_s_at	CF807361	-	-	3e-63	At1g57870	ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.98	GmaAffx.87881.1.S1_at	BU082329	-	-	4e-12	At1g14530	THH1 (TOM THREE HOMOLOG 1)	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.99	Gma.2892.2.S1_a_at	BI424590	-	-	5e-47	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select
0.69	86.8	0.99	Gma.7498.3.S1_at	CA800433	-	-	4e-71	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.99	Gma.5135.2.S1_at	BU925878	-	-	2e-42	At5g08500	transmembrane CLPTM1 family protein	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.99	Gma.5672.9.S1_at	AW781478	-	-	2e-102	At1g54270	EIF4A-2	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.99	GmaAffx.478.5.S1_at	AW569125	-	-	4e+0	At4g00467	-	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.99	GmaAffx.15960.1.S1_at	AI495609	-	-	3e-22	At4g01320	ATSTE24	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.9706.3.S1_x_at	AW133151	-	-	2e-5	At2g39840	TOPP4	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.2892.2.S1_at	BI424590	-	-	5e-47	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	GmaAffx.68394.1.S1_at	BU082577	-	-	3e+0	At5g03660	unknown protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.99	GmaAffx.82721.1.S1_at	AW757398	-	-	6e-67	At3g05530	RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.99	Gma.3084.2.S1_a_at	BU081126	-	-	1e+0	At2g24395	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage