Co-expression analysis

Gene ID	GmaAffx.91420.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g13390: proline-rich extensin-like family protein (HF=4e-3)
Module size	6 genes
NF	0.02
%ile	10.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.86	GmaAffx.91420.1.S1_s_at	CF807145	-	-	4e-3	At4g13390	proline-rich extensin-like family protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.93	GmaAffx.18316.1.S1_at	AW351166	-	-	3e-1	At5g62210	embryo-specific protein-related	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.89	GmaAffx.87561.1.S1_x_at	BQ473189	-	-	4e-3	At1g26250	proline-rich extensin, putative	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.94	GmaAffx.30877.1.S1_at	BE822745	-	-	1e+0	At1g59640	ZCW32	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.96	GmaAffx.83815.1.S1_s_at	BG404904	-	-	1e+0	At1g04330	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.94	GmaAffx.90612.1.S1_at	CF806337	-	-	2e-14	At5g63470	NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)	O.I.	H.G.	S.X.	Please select

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.2	99.6	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.8	98.4	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
5.2	98.1	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293195	77_1130.1O.R082P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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