Co-expression analysis

Gene ID	GmaAffx.91013.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g51105: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.50
%ile	81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.97	GmaAffx.91013.1.S1_s_at	CF806738	-	-	5e+0	At5g51105	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	88.9	0.97	Gma.5491.1.S1_at	AW309940	-	-	1e+1	At5g51105	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	Gma.5491.2.S1_at	BF425401	-	-	3e+0	At5g59570	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.97	Gma.11238.1.S1_at	BQ454110	-	-	3e-121	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.97	GmaAffx.90026.1.S1_s_at	CF805751	-	-	5e-18	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.97	Gma.6602.2.S1_s_at	BI320883	-	-	4e-103	At5g16440	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	95.6	GSM293553	67_3017.2A.R9A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

A co-expression module including the wheat gene, Ta.10648.1.S1_x_at, orthologous to the query gene, GmaAffx.91013.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	Ta.10648.1.S1_x_at	At5g51105	-	-	2e-1	At4g30470	cinnamoyl-CoA reductase-related	O.I.	H.G.	S.X.	Please select
0.60	81.0	Ta.26042.1.S1_at	At5g51105	-	-	2e+0	At3g60260	phagocytosis and cell motility protein ELMO1-related	O.I.	H.G.	S.X.	Please select
0.55	76.8	Ta.27917.1.A1_at	At5g51105	-	-	2e+1	At5g56940	ribosomal protein S16 family protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	Ta.4536.1.A1_at	At5g51105	-	-	1e-12	At4g32140	-	O.I.	H.G.	S.X.	Please select
0.43	62.2	Ta.3487.3.S1_x_at	At5g51105	-	-	7e-8	At1g72080	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	Ta.9817.1.S1_at	At5g51105	-	-	4e+0	At5g46115	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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