Co-expression analysis

Gene ID GmaAffx.91013.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At5g51105: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.50
%ile 81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97GmaAffx.91013.1.S1_s_atCF806738--5e+0At5g51105unknown proteinO.I.H.G.S.X.
0.7388.90.97Gma.5491.1.S1_atAW309940--1e+1At5g51105unknown proteinO.I.H.G.S.X.
0.5071.70.98Gma.5491.2.S1_atBF425401--3e+0At5g59570myb family transcription factorO.I.H.G.S.X.
0.3650.80.97Gma.11238.1.S1_atBQ454110--3e-121At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.3650.80.97GmaAffx.90026.1.S1_s_atCF805751--5e-18At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.3346.10.97Gma.6602.2.S1_s_atBI320883--4e-103At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM29355367_3017.2A.R9A3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.30128.1.S1_at, orthologous to the query gene, GmaAffx.91013.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.2PtpAffx.30128.1.S1_atAt5g51105hypothetical protein-3e+0At2g23910cinnamoyl-CoA reductase-relatedO.I.H.G.S.X.
0.6791.1PtpAffx.69725.1.S1_a_atAt5g51105hypothetical protein-1e+0At2g41130basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.5784.2PtpAffx.2103.1.A1_s_atAt5g51105hypothetical protein-3e-8At4g35320unknown proteinO.I.H.G.S.X.
0.5380.5PtpAffx.206254.1.S1_atAt5g51105hypothetical protein-1e-1At2g07280unknown proteinO.I.H.G.S.X.
0.4471.9PtpAffx.219602.1.S1_s_atAt5g51105hypothetical protein-6e-5At5g39390leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.3863.7PtpAffx.210959.1.S1_x_atAt5g51105hypothetical protein-8e-23At1g54570esterase/lipase/thioesterase family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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