Co-expression analysis

Gene ID GmaAffx.90913.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g53540: 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) (HF=1e-9)
Module size 6 genes
NF 0.90
%ile 99.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.92GmaAffx.90913.1.S1_s_atCF806638--1e-9At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)O.I.H.G.S.X.
0.9198.60.89GmaAffx.72322.1.S1_atAW570011--2e-12At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeO.I.H.G.S.X.
0.9198.60.89Gma.7766.1.S1_atBU550058--6e-3At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)O.I.H.G.S.X.
0.8091.50.93Gma.2185.3.S1_atBM887146--5e-6At3g25230ROF1 (ROTAMASE FKBP 1)O.I.H.G.S.X.
0.7790.30.83Gma.2185.2.S1_a_atAW569879--3e-1At3g25230ROF1 (ROTAMASE FKBP 1)O.I.H.G.S.X.
0.6080.70.92GmaAffx.49167.1.S1_atBE583765--2e-1At5g595302-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
34.999.9GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
21.699.8GSM170929Rust Innoculated, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
17.399.7GSM170925V2 Control, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
14.499.6GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
13.399.5GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
9.099.2GSM170924V2 Control, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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