Co-expression analysis

Gene ID GmaAffx.90548.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g54200: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.17
%ile 38.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.93GmaAffx.90548.1.S1_x_atCF806273--2e-1At1g54200unknown proteinO.I.H.G.S.X.
0.2532.60.98Gma.1312.1.S1_s_atBI969757--0At5g08680ATP synthase beta chain, mitochondrial, putativeO.I.H.G.S.X.
0.2126.60.98Gma.11150.1.S1_x_atAW317399--3e-1At5g42635glycine-rich proteinO.I.H.G.S.X.
0.2126.60.99Gma.2587.1.S1_s_atCD404912--2e-37At5g66140PAD2 (PROTEASOME ALPHA SUBUNIT D 2)O.I.H.G.S.X.
0.0811.00.96GmaAffx.67775.1.S1_atBG405258--4e-12At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)O.I.H.G.S.X.
0.069.00.98GmaAffx.92455.1.S1_s_atCF808180--5e-34At5g42790PAF1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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